Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CDH23Q9H251 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH23Q9H251 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.29■■□□□ 1
CDH23Q9H251 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.29■■□□□ 1
CDH23Q9H251 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.29■■□□□ 1
CDH23Q9H251 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH23Q9H251 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.28■■□□□ 1
CDH23Q9H251 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.28■■□□□ 1
CDH23Q9H251 AC097488.1-201ENST00000507834 756 ntBASIC21.28■■□□□ 1
CDH23Q9H251 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDH23Q9H251 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.28■■□□□ 1
CDH23Q9H251 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.28■■□□□ 1
CDH23Q9H251 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH23Q9H251 AL390719.1-204ENST00000412397 1219 ntBASIC21.28■■□□□ 1
CDH23Q9H251 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.28■■□□□ 1
CDH23Q9H251 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH23Q9H251 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDH23Q9H251 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDH23Q9H251 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH23Q9H251 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH23Q9H251 AL121603.2-201ENST00000557373 2117 ntBASIC21.28■■□□□ 1
CDH23Q9H251 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.28■■□□□ 1
CDH23Q9H251 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.28■■□□□ 1
CDH23Q9H251 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH23Q9H251 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH23Q9H251 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CDH23Q9H251 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDH23Q9H251 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDH23Q9H251 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.27■■□□□ 1
CDH23Q9H251 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH23Q9H251 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.27■■□□□ 1
CDH23Q9H251 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.27■■□□□ 1
CDH23Q9H251 KRT17P6-201ENST00000453795 1220 ntBASIC21.27■■□□□ 1
CDH23Q9H251 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.27■■□□□ 1
CDH23Q9H251 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.27■■□□□ 1
CDH23Q9H251 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH23Q9H251 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH23Q9H251 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH23Q9H251 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH23Q9H251 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CDH23Q9H251 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.27■□□□□ 0.99
CDH23Q9H251 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.27■□□□□ 0.99
CDH23Q9H251 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.27■□□□□ 0.99
CDH23Q9H251 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CDH23Q9H251 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.27■□□□□ 0.99
CDH23Q9H251 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.26■□□□□ 0.99
CDH23Q9H251 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH23Q9H251 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.26■□□□□ 0.99
CDH23Q9H251 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.26■□□□□ 0.99
CDH23Q9H251 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.26■□□□□ 0.99
CDH23Q9H251 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.26■□□□□ 0.99
CDH23Q9H251 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CDH23Q9H251 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH23Q9H251 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDH23Q9H251 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH23Q9H251 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDH23Q9H251 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDH23Q9H251 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH23Q9H251 CR769767.2-201ENST00000622735 460 ntBASIC21.25■□□□□ 0.99
CDH23Q9H251 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDH23Q9H251 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH23Q9H251 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH23Q9H251 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH23Q9H251 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH23Q9H251 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 KRT8P45-201ENST00000414328 1447 ntBASIC21.25■□□□□ 0.99
CDH23Q9H251 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH23Q9H251 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH23Q9H251 COX11P1-201ENST00000489116 835 ntBASIC21.24■□□□□ 0.99
CDH23Q9H251 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.24■□□□□ 0.99
CDH23Q9H251 AC023632.3-201ENST00000521633 145 ntBASIC21.24■□□□□ 0.99
CDH23Q9H251 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH23Q9H251 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms