Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rp1l1Q8CGM2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rp1l1Q8CGM2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.83■□□□□ 0.45
Rp1l1Q8CGM2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rp1l1Q8CGM2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Psmb5-202ENSMUST00000227257 622 ntBASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.82■□□□□ 0.44
Rp1l1Q8CGM2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Gm7230-201ENSMUST00000173026 815 ntBASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rp1l1Q8CGM2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Gm23935-201ENSMUST00000102303 57 ntBASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Gm24270-201ENSMUST00000102326 57 ntBASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Gm24245-201ENSMUST00000157318 57 ntBASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.8■□□□□ 0.44
Rp1l1Q8CGM2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Gm29707-201ENSMUST00000196325 491 ntBASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rp1l1Q8CGM2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rp1l1Q8CGM2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms