Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2bQ8BJF9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2bQ8BJF9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Chmp2bQ8BJF9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp2bQ8BJF9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp2bQ8BJF9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms