Protein–RNA interactions for Protein: Q08236

AVO1, Target of rapamycin complex 2 subunit AVO1, yeastyeast

Predictions only

Length 1,176 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVO1Q08236 tA(UGC)QtA(UGC)Q 76 nt0.13□□□□□ -2.39
AVO1Q08236 YJL113WYJL113W 4647 nt0.09□□□□□ -2.39
AVO1Q08236 snR161snR161 161 nt-0.08□□□□□ -2.42
AVO1Q08236 snR40snR40 97 nt-0.13□□□□□ -2.43
AVO1Q08236 YHL009W-BYHL009W-B 5409 nt-0.25□□□□□ -2.45
AVO1Q08236 snR6snR6 112 nt-0.39□□□□□ -2.47
AVO1Q08236 YOR335W-AYOR335W-A 81 nt-0.42□□□□□ -2.48
AVO1Q08236 CDC65tQ(CUG)M 72 nt-0.44□□□□□ -2.48
AVO1Q08236 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
AVO1Q08236 RPL41BYDL133C-A 78 nt-0.51□□□□□ -2.49
AVO1Q08236 snR33snR33 183 nt-0.6□□□□□ -2.51
AVO1Q08236 snR73snR73 106 nt-0.62□□□□□ -2.51
AVO1Q08236 YMR315W-AYMR315W-A 108 nt-0.62□□□□□ -2.51
AVO1Q08236 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
AVO1Q08236 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
AVO1Q08236 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
AVO1Q08236 tP(UGG)QtP(UGG)Q 72 nt-0.77□□□□□ -2.53
AVO1Q08236 tC(GCA)QtC(GCA)Q 76 nt-0.89□□□□□ -2.55
AVO1Q08236 YOR309CYOR309C 381 nt-0.92□□□□□ -2.56
AVO1Q08236 snR58snR58 96 nt-0.93□□□□□ -2.56
AVO1Q08236 YBR223W-AYBR223W-A 120 nt-1.05□□□□□ -2.58
AVO1Q08236 tY(GUA)QtY(GUA)Q 84 nt-1.16□□□□□ -2.6
AVO1Q08236 YNR077CYNR077C 255 nt-1.19□□□□□ -2.6
AVO1Q08236 snR87snR87 109 nt-1.36□□□□□ -2.63
AVO1Q08236 YBR126W-BYBR126W-B 144 nt-1.77□□□□□ -2.69
AVO1Q08236 YDR543CYDR543C 300 nt-2.4□□□□□ -2.79
AVO1Q08236 YOL166W-AYOL166W-A 156 nt-2.6□□□□□ -2.83
AVO1Q08236 YJL136W-AYJL136W-A 84 nt-3.11□□□□□ -2.91
AVO1Q08236 YJR162CYJR162C 351 nt-3.25□□□□□ -2.93
Retrieved 29 of 7,029 protein–RNA pairs in 6.7 ms