Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 snR40snR40 97 nt0.22□□□□□ -2.37
HDA3Q06623 tA(UGC)QtA(UGC)Q 76 nt0.2□□□□□ -2.38
HDA3Q06623 YJL113WYJL113W 4647 nt0.18□□□□□ -2.38
HDA3Q06623 snR161snR161 161 nt0.06□□□□□ -2.4
HDA3Q06623 RPL41BYDL133C-A 78 nt-0.26□□□□□ -2.45
HDA3Q06623 YOR335W-AYOR335W-A 81 nt-0.32□□□□□ -2.46
HDA3Q06623 snR6snR6 112 nt-0.33□□□□□ -2.46
HDA3Q06623 YHL009W-BYHL009W-B 5409 nt-0.34□□□□□ -2.46
HDA3Q06623 CDC65tQ(CUG)M 72 nt-0.42□□□□□ -2.48
HDA3Q06623 URB1YKL014C 5295 nt-0.52□□□□□ -2.49
HDA3Q06623 snR73snR73 106 nt-0.55□□□□□ -2.5
HDA3Q06623 YMR315W-AYMR315W-A 108 nt-0.55□□□□□ -2.5
HDA3Q06623 tC(GCA)QtC(GCA)Q 76 nt-0.64□□□□□ -2.51
HDA3Q06623 snR33snR33 183 nt-0.7□□□□□ -2.52
HDA3Q06623 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
HDA3Q06623 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
HDA3Q06623 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
HDA3Q06623 snR58snR58 96 nt-0.72□□□□□ -2.52
HDA3Q06623 tP(UGG)QtP(UGG)Q 72 nt-0.81□□□□□ -2.54
HDA3Q06623 YNR077CYNR077C 255 nt-0.94□□□□□ -2.56
HDA3Q06623 YOR309CYOR309C 381 nt-0.94□□□□□ -2.56
HDA3Q06623 YBR223W-AYBR223W-A 120 nt-0.95□□□□□ -2.56
HDA3Q06623 tY(GUA)QtY(GUA)Q 84 nt-1.33□□□□□ -2.62
HDA3Q06623 snR87snR87 109 nt-1.34□□□□□ -2.62
HDA3Q06623 YBR126W-BYBR126W-B 144 nt-1.95□□□□□ -2.72
HDA3Q06623 YDR543CYDR543C 300 nt-2.19□□□□□ -2.76
HDA3Q06623 YOL166W-AYOL166W-A 156 nt-2.3□□□□□ -2.78
HDA3Q06623 YJR162CYJR162C 351 nt-3.21□□□□□ -2.92
HDA3Q06623 YJL136W-AYJL136W-A 84 nt-3.36□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 5.7 ms