Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 tV(UAC)QtV(UAC)Q 76 nt-0.14□□□□□ -2.43
SSL1Q04673 snR77snR77 88 nt-0.2□□□□□ -2.44
SSL1Q04673 snR161snR161 161 nt-0.21□□□□□ -2.44
SSL1Q04673 URB1YKL014C 5295 nt-0.28□□□□□ -2.45
SSL1Q04673 YHL009W-BYHL009W-B 5409 nt-0.38□□□□□ -2.47
SSL1Q04673 snR75snR75 89 nt-0.4□□□□□ -2.47
SSL1Q04673 tT(UGU)G1tT(UGU)G1 72 nt-0.58□□□□□ -2.5
SSL1Q04673 tT(UGU)G2tT(UGU)G2 72 nt-0.58□□□□□ -2.5
SSL1Q04673 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
SSL1Q04673 snR33snR33 183 nt-0.61□□□□□ -2.51
SSL1Q04673 YBR223W-AYBR223W-A 120 nt-0.61□□□□□ -2.51
SSL1Q04673 CDC65tQ(CUG)M 72 nt-0.66□□□□□ -2.52
SSL1Q04673 snR40snR40 97 nt-0.71□□□□□ -2.52
SSL1Q04673 RPL41BYDL133C-A 78 nt-0.72□□□□□ -2.52
SSL1Q04673 snR6snR6 112 nt-0.79□□□□□ -2.54
SSL1Q04673 YMR315W-AYMR315W-A 108 nt-0.79□□□□□ -2.54
SSL1Q04673 YOR335W-AYOR335W-A 81 nt-0.8□□□□□ -2.54
SSL1Q04673 tP(UGG)QtP(UGG)Q 72 nt-0.89□□□□□ -2.55
SSL1Q04673 YOL166W-AYOL166W-A 156 nt-0.94□□□□□ -2.56
SSL1Q04673 snR73snR73 106 nt-0.98□□□□□ -2.57
SSL1Q04673 tY(GUA)QtY(GUA)Q 84 nt-1.13□□□□□ -2.59
SSL1Q04673 YOR309CYOR309C 381 nt-1.18□□□□□ -2.6
SSL1Q04673 snR58snR58 96 nt-1.26□□□□□ -2.61
SSL1Q04673 tC(GCA)QtC(GCA)Q 76 nt-1.31□□□□□ -2.62
SSL1Q04673 YDR543CYDR543C 300 nt-1.39□□□□□ -2.63
SSL1Q04673 YBR126W-BYBR126W-B 144 nt-1.44□□□□□ -2.64
SSL1Q04673 snR87snR87 109 nt-1.73□□□□□ -2.69
SSL1Q04673 YJR162CYJR162C 351 nt-2.46□□□□□ -2.8
SSL1Q04673 YJL136W-AYJL136W-A 84 nt-3.3□□□□□ -2.94
Retrieved 29 of 7,029 protein–RNA pairs in 6.1 ms