Protein–RNA interactions for Protein: Q02948

VPS30, Vacuolar protein sorting-associated protein 30, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS30Q02948 snR77snR77 88 nt-0.27□□□□□ -2.45
VPS30Q02948 snR161snR161 161 nt-0.31□□□□□ -2.46
VPS30Q02948 YHL009W-BYHL009W-B 5409 nt-0.36□□□□□ -2.47
VPS30Q02948 URB1YKL014C 5295 nt-0.53□□□□□ -2.49
VPS30Q02948 snR75snR75 89 nt-0.65□□□□□ -2.51
VPS30Q02948 CDC65tQ(CUG)M 72 nt-0.65□□□□□ -2.51
VPS30Q02948 snR6snR6 112 nt-0.73□□□□□ -2.53
VPS30Q02948 snR33snR33 183 nt-0.74□□□□□ -2.53
VPS30Q02948 YOR335W-AYOR335W-A 81 nt-0.79□□□□□ -2.54
VPS30Q02948 snR40snR40 97 nt-0.83□□□□□ -2.54
VPS30Q02948 YMR315W-AYMR315W-A 108 nt-0.86□□□□□ -2.55
VPS30Q02948 tP(UGG)QtP(UGG)Q 72 nt-0.87□□□□□ -2.55
VPS30Q02948 tT(UGU)G1tT(UGU)G1 72 nt-0.89□□□□□ -2.55
VPS30Q02948 tT(UGU)G2tT(UGU)G2 72 nt-0.89□□□□□ -2.55
VPS30Q02948 tT(UGU)PtT(UGU)P 72 nt-0.89□□□□□ -2.55
VPS30Q02948 snR73snR73 106 nt-0.97□□□□□ -2.56
VPS30Q02948 RPL41BYDL133C-A 78 nt-0.97□□□□□ -2.56
VPS30Q02948 YOR309CYOR309C 381 nt-1.15□□□□□ -2.59
VPS30Q02948 YBR223W-AYBR223W-A 120 nt-1.15□□□□□ -2.59
VPS30Q02948 YNR077CYNR077C 255 nt-1.3□□□□□ -2.62
VPS30Q02948 tY(GUA)QtY(GUA)Q 84 nt-1.4□□□□□ -2.63
VPS30Q02948 snR58snR58 96 nt-1.48□□□□□ -2.65
VPS30Q02948 tC(GCA)QtC(GCA)Q 76 nt-1.52□□□□□ -2.65
VPS30Q02948 snR87snR87 109 nt-1.76□□□□□ -2.69
VPS30Q02948 YBR126W-BYBR126W-B 144 nt-2.21□□□□□ -2.76
VPS30Q02948 YDR543CYDR543C 300 nt-2.69□□□□□ -2.84
VPS30Q02948 YOL166W-AYOL166W-A 156 nt-2.98□□□□□ -2.89
VPS30Q02948 YJL136W-AYJL136W-A 84 nt-3.66□□□□□ -3
VPS30Q02948 YJR162CYJR162C 351 nt-3.76□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 5.8 ms