Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 snR40snR40 97 nt0.27□□□□□ -2.37
NPL3Q01560 tA(UGC)QtA(UGC)Q 76 nt0.14□□□□□ -2.39
NPL3Q01560 snR161snR161 161 nt0.11□□□□□ -2.39
NPL3Q01560 YJL113WYJL113W 4647 nt-0.08□□□□□ -2.42
NPL3Q01560 RPL41BYDL133C-A 78 nt-0.12□□□□□ -2.43
NPL3Q01560 YNR077CYNR077C 255 nt-0.14□□□□□ -2.43
NPL3Q01560 YOR335W-AYOR335W-A 81 nt-0.15□□□□□ -2.43
NPL3Q01560 URB1YKL014C 5295 nt-0.16□□□□□ -2.44
NPL3Q01560 snR6snR6 112 nt-0.19□□□□□ -2.44
NPL3Q01560 YHL009W-BYHL009W-B 5409 nt-0.2□□□□□ -2.44
NPL3Q01560 snR33snR33 183 nt-0.22□□□□□ -2.44
NPL3Q01560 tT(UGU)G1tT(UGU)G1 72 nt-0.24□□□□□ -2.45
NPL3Q01560 tT(UGU)G2tT(UGU)G2 72 nt-0.24□□□□□ -2.45
NPL3Q01560 tT(UGU)PtT(UGU)P 72 nt-0.24□□□□□ -2.45
NPL3Q01560 CDC65tQ(CUG)M 72 nt-0.28□□□□□ -2.45
NPL3Q01560 YBR223W-AYBR223W-A 120 nt-0.28□□□□□ -2.45
NPL3Q01560 tP(UGG)QtP(UGG)Q 72 nt-0.29□□□□□ -2.46
NPL3Q01560 YMR315W-AYMR315W-A 108 nt-0.32□□□□□ -2.46
NPL3Q01560 snR73snR73 106 nt-0.33□□□□□ -2.46
NPL3Q01560 tC(GCA)QtC(GCA)Q 76 nt-0.41□□□□□ -2.48
NPL3Q01560 tY(GUA)QtY(GUA)Q 84 nt-0.41□□□□□ -2.48
NPL3Q01560 YOR309CYOR309C 381 nt-0.46□□□□□ -2.48
NPL3Q01560 snR58snR58 96 nt-0.48□□□□□ -2.49
NPL3Q01560 YOL166W-AYOL166W-A 156 nt-0.52□□□□□ -2.49
NPL3Q01560 YBR126W-BYBR126W-B 144 nt-0.61□□□□□ -2.51
NPL3Q01560 YDR543CYDR543C 300 nt-0.64□□□□□ -2.51
NPL3Q01560 snR87snR87 109 nt-0.74□□□□□ -2.53
NPL3Q01560 YJR162CYJR162C 351 nt-1.04□□□□□ -2.58
NPL3Q01560 YJL136W-AYJL136W-A 84 nt-1.12□□□□□ -2.59
Retrieved 29 of 7,029 protein–RNA pairs in 8.1 ms