Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 PAU9YBL108C-A 129 nt0.18□□□□□ -2.38
UBP3Q01477 tA(UGC)QtA(UGC)Q 76 nt0.14□□□□□ -2.39
UBP3Q01477 snR40snR40 97 nt-0.06□□□□□ -2.42
UBP3Q01477 snR161snR161 161 nt-0.07□□□□□ -2.42
UBP3Q01477 YHL009W-BYHL009W-B 5409 nt-0.12□□□□□ -2.43
UBP3Q01477 snR6snR6 112 nt-0.32□□□□□ -2.46
UBP3Q01477 YOR335W-AYOR335W-A 81 nt-0.37□□□□□ -2.47
UBP3Q01477 CDC65tQ(CUG)M 72 nt-0.38□□□□□ -2.47
UBP3Q01477 tT(UGU)G1tT(UGU)G1 72 nt-0.39□□□□□ -2.47
UBP3Q01477 tT(UGU)G2tT(UGU)G2 72 nt-0.39□□□□□ -2.47
UBP3Q01477 tT(UGU)PtT(UGU)P 72 nt-0.39□□□□□ -2.47
UBP3Q01477 URB1YKL014C 5295 nt-0.4□□□□□ -2.47
UBP3Q01477 RPL41BYDL133C-A 78 nt-0.45□□□□□ -2.48
UBP3Q01477 snR33snR33 183 nt-0.5□□□□□ -2.49 RIP-Chip
UBP3Q01477 YNR077CYNR077C 255 nt-0.52□□□□□ -2.49
UBP3Q01477 snR73snR73 106 nt-0.54□□□□□ -2.5
UBP3Q01477 YMR315W-AYMR315W-A 108 nt-0.57□□□□□ -2.5
UBP3Q01477 YBR223W-AYBR223W-A 120 nt-0.58□□□□□ -2.5
UBP3Q01477 tP(UGG)QtP(UGG)Q 72 nt-0.7□□□□□ -2.52
UBP3Q01477 tC(GCA)QtC(GCA)Q 76 nt-0.78□□□□□ -2.53
UBP3Q01477 snR58snR58 96 nt-0.82□□□□□ -2.54
UBP3Q01477 YOR309CYOR309C 381 nt-0.85□□□□□ -2.55
UBP3Q01477 tY(GUA)QtY(GUA)Q 84 nt-0.95□□□□□ -2.56
UBP3Q01477 YOL166W-AYOL166W-A 156 nt-1.2□□□□□ -2.6
UBP3Q01477 snR87snR87 109 nt-1.24□□□□□ -2.61
UBP3Q01477 YDR543CYDR543C 300 nt-1.28□□□□□ -2.61
UBP3Q01477 YBR126W-BYBR126W-B 144 nt-1.28□□□□□ -2.61
UBP3Q01477 YJR162CYJR162C 351 nt-1.98□□□□□ -2.73
UBP3Q01477 YJL136W-AYJL136W-A 84 nt-2.64□□□□□ -2.83
Retrieved 29 of 7,029 protein–RNA pairs in 9.6 ms