Protein–RNA interactions for Protein: Q00362

CDC55, Protein phosphatase PP2A regulatory subunit B, yeastyeast

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC55Q00362 tA(UGC)QtA(UGC)Q 76 nt0.11□□□□□ -2.39
CDC55Q00362 YJL113WYJL113W 4647 nt0.09□□□□□ -2.4
CDC55Q00362 snR161snR161 161 nt-0.09□□□□□ -2.42
CDC55Q00362 snR40snR40 97 nt-0.14□□□□□ -2.43
CDC55Q00362 YHL009W-BYHL009W-B 5409 nt-0.18□□□□□ -2.44
CDC55Q00362 snR6snR6 112 nt-0.32□□□□□ -2.46
CDC55Q00362 YOR335W-AYOR335W-A 81 nt-0.35□□□□□ -2.47
CDC55Q00362 CDC65tQ(CUG)M 72 nt-0.37□□□□□ -2.47
CDC55Q00362 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
CDC55Q00362 RPL41BYDL133C-A 78 nt-0.51□□□□□ -2.49
CDC55Q00362 snR73snR73 106 nt-0.52□□□□□ -2.49
CDC55Q00362 YMR315W-AYMR315W-A 108 nt-0.56□□□□□ -2.5
CDC55Q00362 snR33snR33 183 nt-0.59□□□□□ -2.5
CDC55Q00362 tP(UGG)QtP(UGG)Q 72 nt-0.65□□□□□ -2.51
CDC55Q00362 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
CDC55Q00362 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
CDC55Q00362 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
CDC55Q00362 YOR309CYOR309C 381 nt-0.79□□□□□ -2.54
CDC55Q00362 YNR077CYNR077C 255 nt-0.8□□□□□ -2.54
CDC55Q00362 tC(GCA)QtC(GCA)Q 76 nt-0.82□□□□□ -2.54
CDC55Q00362 snR58snR58 96 nt-0.87□□□□□ -2.55
CDC55Q00362 YBR223W-AYBR223W-A 120 nt-0.89□□□□□ -2.55
CDC55Q00362 tY(GUA)QtY(GUA)Q 84 nt-1.12□□□□□ -2.59
CDC55Q00362 snR87snR87 109 nt-1.18□□□□□ -2.6
CDC55Q00362 YBR126W-BYBR126W-B 144 nt-1.87□□□□□ -2.71
CDC55Q00362 YOL166W-AYOL166W-A 156 nt-2.08□□□□□ -2.74
CDC55Q00362 YDR543CYDR543C 300 nt-2.1□□□□□ -2.75
CDC55Q00362 YJL136W-AYJL136W-A 84 nt-2.87□□□□□ -2.87
CDC55Q00362 YJR162CYJR162C 351 nt-3.14□□□□□ -2.91
Retrieved 29 of 7,029 protein–RNA pairs in 5.9 ms