Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 snR161snR161 161 nt-0.22□□□□□ -2.44
UFD2P54860 snR75snR75 89 nt-0.26□□□□□ -2.45
UFD2P54860 YJL113WYJL113W 4647 nt-0.37□□□□□ -2.47
UFD2P54860 URB1YKL014C 5295 nt-0.58□□□□□ -2.5
UFD2P54860 YHL009W-BYHL009W-B 5409 nt-0.6□□□□□ -2.51
UFD2P54860 snR40snR40 97 nt-0.66□□□□□ -2.52
UFD2P54860 CDC65tQ(CUG)M 72 nt-0.7□□□□□ -2.52
UFD2P54860 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
UFD2P54860 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
UFD2P54860 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
UFD2P54860 snR33snR33 183 nt-0.75□□□□□ -2.53
UFD2P54860 snR6snR6 112 nt-0.76□□□□□ -2.53
UFD2P54860 YOR335W-AYOR335W-A 81 nt-0.81□□□□□ -2.54
UFD2P54860 RPL41BYDL133C-A 78 nt-0.84□□□□□ -2.54
UFD2P54860 YMR315W-AYMR315W-A 108 nt-0.87□□□□□ -2.55
UFD2P54860 tP(UGG)QtP(UGG)Q 72 nt-0.97□□□□□ -2.56
UFD2P54860 YNR077CYNR077C 255 nt-1.01□□□□□ -2.57
UFD2P54860 snR73snR73 106 nt-1.02□□□□□ -2.57
UFD2P54860 YBR223W-AYBR223W-A 120 nt-1.05□□□□□ -2.58
UFD2P54860 YOR309CYOR309C 381 nt-1.26□□□□□ -2.61
UFD2P54860 tY(GUA)QtY(GUA)Q 84 nt-1.42□□□□□ -2.64
UFD2P54860 snR58snR58 96 nt-1.44□□□□□ -2.64
UFD2P54860 tC(GCA)QtC(GCA)Q 76 nt-1.48□□□□□ -2.65
UFD2P54860 YBR126W-BYBR126W-B 144 nt-1.84□□□□□ -2.7
UFD2P54860 snR87snR87 109 nt-1.89□□□□□ -2.71
UFD2P54860 YDR543CYDR543C 300 nt-2.4□□□□□ -2.79
UFD2P54860 YOL166W-AYOL166W-A 156 nt-2.74□□□□□ -2.85
UFD2P54860 YJR162CYJR162C 351 nt-3.26□□□□□ -2.93
UFD2P54860 YJL136W-AYJL136W-A 84 nt-3.99□□□□□ -3.05
Retrieved 29 of 7,029 protein–RNA pairs in 40.5 ms