Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 snR77snR77 88 nt-0.31□□□□□ -2.46
HDA1P53973 tV(UAC)QtV(UAC)Q 76 nt-0.31□□□□□ -2.46
HDA1P53973 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
HDA1P53973 YHL009W-BYHL009W-B 5409 nt-0.51□□□□□ -2.49
HDA1P53973 tT(UGU)G1tT(UGU)G1 72 nt-0.55□□□□□ -2.5
HDA1P53973 tT(UGU)G2tT(UGU)G2 72 nt-0.55□□□□□ -2.5
HDA1P53973 tT(UGU)PtT(UGU)P 72 nt-0.55□□□□□ -2.5
HDA1P53973 snR33snR33 183 nt-0.55□□□□□ -2.5
HDA1P53973 YNR077CYNR077C 255 nt-0.58□□□□□ -2.5
HDA1P53973 snR75snR75 89 nt-0.65□□□□□ -2.51
HDA1P53973 CDC65tQ(CUG)M 72 nt-0.74□□□□□ -2.53
HDA1P53973 tP(UGG)QtP(UGG)Q 72 nt-0.75□□□□□ -2.53
HDA1P53973 YBR223W-AYBR223W-A 120 nt-0.76□□□□□ -2.53
HDA1P53973 RPL41BYDL133C-A 78 nt-0.83□□□□□ -2.54
HDA1P53973 YMR315W-AYMR315W-A 108 nt-0.84□□□□□ -2.54
HDA1P53973 snR40snR40 97 nt-0.89□□□□□ -2.55
HDA1P53973 YOR335W-AYOR335W-A 81 nt-0.92□□□□□ -2.56
HDA1P53973 snR6snR6 112 nt-0.93□□□□□ -2.56
HDA1P53973 tY(GUA)QtY(GUA)Q 84 nt-1.06□□□□□ -2.58
HDA1P53973 snR73snR73 106 nt-1.11□□□□□ -2.59
HDA1P53973 YOR309CYOR309C 381 nt-1.25□□□□□ -2.61
HDA1P53973 snR58snR58 96 nt-1.45□□□□□ -2.64
HDA1P53973 YBR126W-BYBR126W-B 144 nt-1.49□□□□□ -2.65
HDA1P53973 tC(GCA)QtC(GCA)Q 76 nt-1.51□□□□□ -2.65
HDA1P53973 YOL166W-AYOL166W-A 156 nt-1.68□□□□□ -2.68
HDA1P53973 YDR543CYDR543C 300 nt-1.71□□□□□ -2.68
HDA1P53973 snR87snR87 109 nt-1.87□□□□□ -2.71
HDA1P53973 YJR162CYJR162C 351 nt-2.65□□□□□ -2.83
HDA1P53973 YJL136W-AYJL136W-A 84 nt-2.91□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 65.6 ms