Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 snR161snR161 161 nt-0.19□□□□□ -2.44
ATG4P53867 YJL113WYJL113W 4647 nt-0.2□□□□□ -2.44
ATG4P53867 snR75snR75 89 nt-0.39□□□□□ -2.47
ATG4P53867 URB1YKL014C 5295 nt-0.43□□□□□ -2.48
ATG4P53867 YHL009W-BYHL009W-B 5409 nt-0.47□□□□□ -2.48
ATG4P53867 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
ATG4P53867 tT(UGU)G1tT(UGU)G1 72 nt-0.6□□□□□ -2.51
ATG4P53867 tT(UGU)G2tT(UGU)G2 72 nt-0.6□□□□□ -2.51
ATG4P53867 tT(UGU)PtT(UGU)P 72 nt-0.6□□□□□ -2.51
ATG4P53867 snR40snR40 97 nt-0.62□□□□□ -2.51
ATG4P53867 snR33snR33 183 nt-0.64□□□□□ -2.51
ATG4P53867 YOR335W-AYOR335W-A 81 nt-0.65□□□□□ -2.51
ATG4P53867 snR6snR6 112 nt-0.67□□□□□ -2.52
ATG4P53867 YMR315W-AYMR315W-A 108 nt-0.68□□□□□ -2.52
ATG4P53867 RPL41BYDL133C-A 78 nt-0.72□□□□□ -2.52
ATG4P53867 tP(UGG)QtP(UGG)Q 72 nt-0.73□□□□□ -2.53
ATG4P53867 snR73snR73 106 nt-0.83□□□□□ -2.54
ATG4P53867 YBR223W-AYBR223W-A 120 nt-0.89□□□□□ -2.55
ATG4P53867 YNR077CYNR077C 255 nt-0.99□□□□□ -2.57
ATG4P53867 YOR309CYOR309C 381 nt-0.99□□□□□ -2.57
ATG4P53867 tY(GUA)QtY(GUA)Q 84 nt-1.21□□□□□ -2.6
ATG4P53867 snR58snR58 96 nt-1.24□□□□□ -2.61
ATG4P53867 tC(GCA)QtC(GCA)Q 76 nt-1.25□□□□□ -2.61
ATG4P53867 snR87snR87 109 nt-1.51□□□□□ -2.65
ATG4P53867 YBR126W-BYBR126W-B 144 nt-1.63□□□□□ -2.67
ATG4P53867 YDR543CYDR543C 300 nt-2.01□□□□□ -2.73
ATG4P53867 YOL166W-AYOL166W-A 156 nt-2.29□□□□□ -2.78
ATG4P53867 YJR162CYJR162C 351 nt-2.83□□□□□ -2.86
ATG4P53867 YJL136W-AYJL136W-A 84 nt-3.13□□□□□ -2.91
Retrieved 29 of 7,029 protein–RNA pairs in 21 ms