Protein–RNA interactions for Protein: P53297

PBP1, PAB1-binding protein 1, yeastyeast

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PBP1P53297 tA(UGC)QtA(UGC)Q 76 nt0.11□□□□□ -2.39
PBP1P53297 snR161snR161 161 nt-0.05□□□□□ -2.42
PBP1P53297 snR40snR40 97 nt-0.05□□□□□ -2.42
PBP1P53297 YJL113WYJL113W 4647 nt-0.1□□□□□ -2.42
PBP1P53297 snR6snR6 112 nt-0.29□□□□□ -2.46
PBP1P53297 YOR335W-AYOR335W-A 81 nt-0.29□□□□□ -2.46
PBP1P53297 CDC65tQ(CUG)M 72 nt-0.37□□□□□ -2.47
PBP1P53297 URB1YKL014C 5295 nt-0.41□□□□□ -2.48
PBP1P53297 tT(UGU)G1tT(UGU)G1 72 nt-0.45□□□□□ -2.48
PBP1P53297 tT(UGU)G2tT(UGU)G2 72 nt-0.45□□□□□ -2.48
PBP1P53297 tT(UGU)PtT(UGU)P 72 nt-0.45□□□□□ -2.48
PBP1P53297 RPL41BYDL133C-A 78 nt-0.46□□□□□ -2.48
PBP1P53297 YHL009W-BYHL009W-B 5409 nt-0.47□□□□□ -2.48
PBP1P53297 snR73snR73 106 nt-0.49□□□□□ -2.49
PBP1P53297 YMR315W-AYMR315W-A 108 nt-0.51□□□□□ -2.49
PBP1P53297 YNR077CYNR077C 255 nt-0.56□□□□□ -2.5
PBP1P53297 snR33snR33 183 nt-0.61□□□□□ -2.51
PBP1P53297 tP(UGG)QtP(UGG)Q 72 nt-0.62□□□□□ -2.51
PBP1P53297 YBR223W-AYBR223W-A 120 nt-0.65□□□□□ -2.51
PBP1P53297 YOR309CYOR309C 381 nt-0.76□□□□□ -2.53
PBP1P53297 tC(GCA)QtC(GCA)Q 76 nt-0.81□□□□□ -2.54
PBP1P53297 snR58snR58 96 nt-0.88□□□□□ -2.55
PBP1P53297 snR87snR87 109 nt-1.15□□□□□ -2.59
PBP1P53297 tY(GUA)QtY(GUA)Q 84 nt-1.15□□□□□ -2.59
PBP1P53297 YOL166W-AYOL166W-A 156 nt-1.41□□□□□ -2.64
PBP1P53297 YBR126W-BYBR126W-B 144 nt-1.42□□□□□ -2.64
PBP1P53297 YDR543CYDR543C 300 nt-1.44□□□□□ -2.64
PBP1P53297 YJR162CYJR162C 351 nt-2.23□□□□□ -2.77
PBP1P53297 YJL136W-AYJL136W-A 84 nt-2.9□□□□□ -2.87
Retrieved 29 of 7,029 protein–RNA pairs in 5.5 ms