Protein–RNA interactions for Protein: P53285

VPS62, Vacuolar protein sorting-associated protein 62, yeastyeast

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS62P53285 tA(UGC)QtA(UGC)Q 76 nt0.1□□□□□ -2.39
VPS62P53285 snR161snR161 161 nt0.02□□□□□ -2.41
VPS62P53285 snR40snR40 97 nt0.01□□□□□ -2.41
VPS62P53285 YJL113WYJL113W 4647 nt-0.08□□□□□ -2.42
VPS62P53285 RPL41BYDL133C-A 78 nt-0.33□□□□□ -2.46
VPS62P53285 YOR335W-AYOR335W-A 81 nt-0.34□□□□□ -2.46
VPS62P53285 snR6snR6 112 nt-0.37□□□□□ -2.47
VPS62P53285 CDC65tQ(CUG)M 72 nt-0.42□□□□□ -2.48
VPS62P53285 snR33snR33 183 nt-0.43□□□□□ -2.48
VPS62P53285 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
VPS62P53285 tT(UGU)G1tT(UGU)G1 72 nt-0.46□□□□□ -2.48
VPS62P53285 tT(UGU)G2tT(UGU)G2 72 nt-0.46□□□□□ -2.48
VPS62P53285 tT(UGU)PtT(UGU)P 72 nt-0.46□□□□□ -2.48
VPS62P53285 YHL009W-BYHL009W-B 5409 nt-0.46□□□□□ -2.48
VPS62P53285 YMR315W-AYMR315W-A 108 nt-0.47□□□□□ -2.48
VPS62P53285 tP(UGG)QtP(UGG)Q 72 nt-0.48□□□□□ -2.49
VPS62P53285 YNR077CYNR077C 255 nt-0.48□□□□□ -2.49
VPS62P53285 snR73snR73 106 nt-0.54□□□□□ -2.5
VPS62P53285 YOR309CYOR309C 381 nt-0.69□□□□□ -2.52
VPS62P53285 tC(GCA)QtC(GCA)Q 76 nt-0.73□□□□□ -2.53
VPS62P53285 snR58snR58 96 nt-0.78□□□□□ -2.53
VPS62P53285 YBR223W-AYBR223W-A 120 nt-0.79□□□□□ -2.54
VPS62P53285 tY(GUA)QtY(GUA)Q 84 nt-0.82□□□□□ -2.54
VPS62P53285 snR87snR87 109 nt-1.11□□□□□ -2.59
VPS62P53285 YBR126W-BYBR126W-B 144 nt-1.25□□□□□ -2.61
VPS62P53285 YDR543CYDR543C 300 nt-1.76□□□□□ -2.69
VPS62P53285 YOL166W-AYOL166W-A 156 nt-1.89□□□□□ -2.71
VPS62P53285 YJL136W-AYJL136W-A 84 nt-2.15□□□□□ -2.75
VPS62P53285 YJR162CYJR162C 351 nt-2.32□□□□□ -2.78
Retrieved 29 of 7,029 protein–RNA pairs in 3.1 ms