Protein–RNA interactions for Protein: P53131

PRP43, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP43P53131 snR128snR128 126 nt0.39□□□□□ -2.35
PRP43P53131 tA(UGC)QtA(UGC)Q 76 nt0.28□□□□□ -2.36
PRP43P53131 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
PRP43P53131 snR6snR6 112 nt0.25□□□□□ -2.37
PRP43P53131 YOR335W-AYOR335W-A 81 nt0.24□□□□□ -2.37
PRP43P53131 snR161snR161 161 nt0.22□□□□□ -2.37
PRP43P53131 RPL41BYDL133C-A 78 nt0.07□□□□□ -2.4
PRP43P53131 snR73snR73 106 nt0.06□□□□□ -2.4
PRP43P53131 tC(GCA)QtC(GCA)Q 76 nt0□□□□□ -2.41
PRP43P53131 CDC65tQ(CUG)M 72 nt-0.04□□□□□ -2.42
PRP43P53131 snR58snR58 96 nt-0.14□□□□□ -2.43
PRP43P53131 YMR315W-AYMR315W-A 108 nt-0.15□□□□□ -2.43
PRP43P53131 URB1YKL014C 5295 nt-0.15□□□□□ -2.43
PRP43P53131 YHL009W-BYHL009W-B 5409 nt-0.22□□□□□ -2.44
PRP43P53131 YOR309CYOR309C 381 nt-0.33□□□□□ -2.46
PRP43P53131 tP(UGG)QtP(UGG)Q 72 nt-0.37□□□□□ -2.47
PRP43P53131 snR33snR33 183 nt-0.45□□□□□ -2.48
PRP43P53131 snR87snR87 109 nt-0.47□□□□□ -2.48
PRP43P53131 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
PRP43P53131 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
PRP43P53131 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
PRP43P53131 YBR223W-AYBR223W-A 120 nt-0.78□□□□□ -2.53
PRP43P53131 tY(GUA)QtY(GUA)Q 84 nt-0.85□□□□□ -2.55
PRP43P53131 YNR077CYNR077C 255 nt-0.85□□□□□ -2.55
PRP43P53131 YBR126W-BYBR126W-B 144 nt-1.4□□□□□ -2.63
PRP43P53131 YDR543CYDR543C 300 nt-1.78□□□□□ -2.69
PRP43P53131 YJL136W-AYJL136W-A 84 nt-2□□□□□ -2.73
PRP43P53131 YOL166W-AYOL166W-A 156 nt-2.04□□□□□ -2.74
PRP43P53131 YJR162CYJR162C 351 nt-2.43□□□□□ -2.8
Retrieved 29 of 7,029 protein–RNA pairs in 2.7 ms