Protein–RNA interactions for Protein: P53104

ATG1, Serine/threonine-protein kinase ATG1, yeastyeast

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG1P53104 snR77snR77 88 nt-0.29□□□□□ -2.46
ATG1P53104 YJL113WYJL113W 4647 nt-0.38□□□□□ -2.47
ATG1P53104 URB1YKL014C 5295 nt-0.41□□□□□ -2.47
ATG1P53104 YNR077CYNR077C 255 nt-0.42□□□□□ -2.48
ATG1P53104 YHL009W-BYHL009W-B 5409 nt-0.53□□□□□ -2.49
ATG1P53104 snR75snR75 89 nt-0.61□□□□□ -2.51
ATG1P53104 snR33snR33 183 nt-0.63□□□□□ -2.51
ATG1P53104 tT(UGU)G1tT(UGU)G1 72 nt-0.67□□□□□ -2.52
ATG1P53104 tT(UGU)G2tT(UGU)G2 72 nt-0.67□□□□□ -2.52
ATG1P53104 tT(UGU)PtT(UGU)P 72 nt-0.67□□□□□ -2.52
ATG1P53104 CDC65tQ(CUG)M 72 nt-0.84□□□□□ -2.54
ATG1P53104 YBR223W-AYBR223W-A 120 nt-0.86□□□□□ -2.55
ATG1P53104 tP(UGG)QtP(UGG)Q 72 nt-0.9□□□□□ -2.55
ATG1P53104 snR40snR40 97 nt-0.93□□□□□ -2.56
ATG1P53104 RPL41BYDL133C-A 78 nt-0.96□□□□□ -2.56
ATG1P53104 snR6snR6 112 nt-0.99□□□□□ -2.57
ATG1P53104 YMR315W-AYMR315W-A 108 nt-1□□□□□ -2.57
ATG1P53104 YOR335W-AYOR335W-A 81 nt-1.04□□□□□ -2.58
ATG1P53104 tY(GUA)QtY(GUA)Q 84 nt-1.23□□□□□ -2.61
ATG1P53104 snR73snR73 106 nt-1.25□□□□□ -2.61
ATG1P53104 YOR309CYOR309C 381 nt-1.45□□□□□ -2.64
ATG1P53104 YOL166W-AYOL166W-A 156 nt-1.57□□□□□ -2.66
ATG1P53104 snR58snR58 96 nt-1.64□□□□□ -2.67
ATG1P53104 tC(GCA)QtC(GCA)Q 76 nt-1.73□□□□□ -2.69
ATG1P53104 YBR126W-BYBR126W-B 144 nt-1.73□□□□□ -2.69
ATG1P53104 YDR543CYDR543C 300 nt-1.93□□□□□ -2.72
ATG1P53104 snR87snR87 109 nt-2.17□□□□□ -2.76
ATG1P53104 YJR162CYJR162C 351 nt-3.17□□□□□ -2.92
ATG1P53104 YJL136W-AYJL136W-A 84 nt-3.33□□□□□ -2.94
Retrieved 29 of 7,029 protein–RNA pairs in 5 ms