Protein–RNA interactions for Protein: P53046

ROM1, RHO1 GDP-GTP exchange protein 1, yeastyeast

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROM1P53046 snR77snR77 88 nt0.09□□□□□ -2.4
ROM1P53046 snR161snR161 161 nt-0.08□□□□□ -2.42
ROM1P53046 YJL113WYJL113W 4647 nt-0.12□□□□□ -2.43
ROM1P53046 YNR077CYNR077C 255 nt-0.13□□□□□ -2.43
ROM1P53046 snR40snR40 97 nt-0.3□□□□□ -2.46
ROM1P53046 YHL009W-BYHL009W-B 5409 nt-0.33□□□□□ -2.46
ROM1P53046 URB1YKL014C 5295 nt-0.45□□□□□ -2.48
ROM1P53046 RPL41BYDL133C-A 78 nt-0.54□□□□□ -2.5
ROM1P53046 tT(UGU)G1tT(UGU)G1 72 nt-0.54□□□□□ -2.5
ROM1P53046 tT(UGU)G2tT(UGU)G2 72 nt-0.54□□□□□ -2.5
ROM1P53046 tT(UGU)PtT(UGU)P 72 nt-0.54□□□□□ -2.5
ROM1P53046 snR33snR33 183 nt-0.56□□□□□ -2.5
ROM1P53046 CDC65tQ(CUG)M 72 nt-0.63□□□□□ -2.51
ROM1P53046 YBR223W-AYBR223W-A 120 nt-0.65□□□□□ -2.51
ROM1P53046 snR6snR6 112 nt-0.67□□□□□ -2.52
ROM1P53046 YOR335W-AYOR335W-A 81 nt-0.67□□□□□ -2.52
ROM1P53046 tP(UGG)QtP(UGG)Q 72 nt-0.72□□□□□ -2.52
ROM1P53046 YMR315W-AYMR315W-A 108 nt-0.76□□□□□ -2.53
ROM1P53046 snR73snR73 106 nt-0.89□□□□□ -2.55
ROM1P53046 YOL166W-AYOL166W-A 156 nt-1.05□□□□□ -2.58
ROM1P53046 tY(GUA)QtY(GUA)Q 84 nt-1.08□□□□□ -2.58
ROM1P53046 snR58snR58 96 nt-1.11□□□□□ -2.59
ROM1P53046 tC(GCA)QtC(GCA)Q 76 nt-1.11□□□□□ -2.59
ROM1P53046 YOR309CYOR309C 381 nt-1.13□□□□□ -2.59
ROM1P53046 YDR543CYDR543C 300 nt-1.5□□□□□ -2.65
ROM1P53046 YBR126W-BYBR126W-B 144 nt-1.55□□□□□ -2.66
ROM1P53046 snR87snR87 109 nt-1.75□□□□□ -2.69
ROM1P53046 YJR162CYJR162C 351 nt-2.57□□□□□ -2.82
ROM1P53046 YJL136W-AYJL136W-A 84 nt-2.81□□□□□ -2.86
Retrieved 29 of 7,029 protein–RNA pairs in 3.1 ms