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Protein–RNA interactions for Protein: P49954
NIT3, Omega-amidase NIT3, yeast
Predictions only
Length
291 aa
.
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Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
NIT3
P49954
tV(UAC)Q
tV(UAC)Q
76 nt
-0.41
□□□□□ -2.48
NIT3
P49954
YHL009W-B
YHL009W-B
5409 nt
-0.49
□□□□□ -2.49
NIT3
P49954
URB1
YKL014C
5295 nt
-0.51
□□□□□ -2.49
NIT3
P49954
snR33
snR33
183 nt
-0.55
□□□□□ -2.5
NIT3
P49954
CDC65
tQ(CUG)M
72 nt
-0.6
□□□□□ -2.51
NIT3
P49954
YKL096C-B
YKL096C-B
150 nt
-0.63
□□□□□ -2.51
NIT3
P49954
tP(UGG)Q
tP(UGG)Q
72 nt
-0.64
□□□□□ -2.51
NIT3
P49954
YMR315W-A
YMR315W-A
108 nt
-0.66
□□□□□ -2.52
NIT3
P49954
tT(UGU)G1
tT(UGU)G1
72 nt
-0.72
□□□□□ -2.52
NIT3
P49954
tT(UGU)G2
tT(UGU)G2
72 nt
-0.72
□□□□□ -2.52
NIT3
P49954
tT(UGU)P
tT(UGU)P
72 nt
-0.72
□□□□□ -2.52
NIT3
P49954
snR6
snR6
112 nt
-0.75
□□□□□ -2.53
NIT3
P49954
YOR335W-A
YOR335W-A
81 nt
-0.75
□□□□□ -2.53
NIT3
P49954
RPL41B
YDL133C-A
78 nt
-0.8
□□□□□ -2.54
NIT3
P49954
snR73
snR73
106 nt
-0.89
□□□□□ -2.55
NIT3
P49954
snR40
snR40
97 nt
-0.89
□□□□□ -2.55
NIT3
P49954
snR75
snR75
89 nt
-0.9
□□□□□ -2.55
NIT3
P49954
YOR309C
YOR309C
381 nt
-0.93
□□□□□ -2.56
NIT3
P49954
YBR223W-A
YBR223W-A
120 nt
-1
□□□□□ -2.57
NIT3
P49954
tY(GUA)Q
tY(GUA)Q
84 nt
-1.06
□□□□□ -2.58
NIT3
P49954
YNR077C
YNR077C
255 nt
-1.28
□□□□□ -2.61
NIT3
P49954
snR58
snR58
96 nt
-1.3
□□□□□ -2.62
NIT3
P49954
tC(GCA)Q
tC(GCA)Q
76 nt
-1.37
□□□□□ -2.63
NIT3
P49954
snR87
snR87
109 nt
-1.44
□□□□□ -2.64
NIT3
P49954
YBR126W-B
YBR126W-B
144 nt
-1.77
□□□□□ -2.69
NIT3
P49954
YDR543C
YDR543C
300 nt
-2.3
□□□□□ -2.78
NIT3
P49954
YOL166W-A
YOL166W-A
156 nt
-2.57
□□□□□ -2.82
NIT3
P49954
YJL136W-A
YJL136W-A
84 nt
-2.7
□□□□□ -2.84
NIT3
P49954
YJR162C
YJR162C
351 nt
-3.24
□□□□□ -2.93
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Retrieved 29 of 7,029 protein–RNA pairs in 21.9 ms