Protein–RNA interactions for Protein: P48565

RIM21, pH-response regulator protein palH/RIM21, yeastyeast

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM21P48565 tA(UGC)QtA(UGC)Q 76 nt0.11□□□□□ -2.39
RIM21P48565 snR161snR161 161 nt-0.06□□□□□ -2.42
RIM21P48565 YJL113WYJL113W 4647 nt-0.16□□□□□ -2.43
RIM21P48565 snR40snR40 97 nt-0.25□□□□□ -2.45
RIM21P48565 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
RIM21P48565 YHL009W-BYHL009W-B 5409 nt-0.53□□□□□ -2.49
RIM21P48565 RPL41BYDL133C-A 78 nt-0.54□□□□□ -2.5
RIM21P48565 CDC65tQ(CUG)M 72 nt-0.63□□□□□ -2.51
RIM21P48565 snR6snR6 112 nt-0.64□□□□□ -2.51
RIM21P48565 snR33snR33 183 nt-0.65□□□□□ -2.51
RIM21P48565 YOR335W-AYOR335W-A 81 nt-0.67□□□□□ -2.52
RIM21P48565 YMR315W-AYMR315W-A 108 nt-0.76□□□□□ -2.53
RIM21P48565 tT(UGU)G1tT(UGU)G1 72 nt-0.79□□□□□ -2.54
RIM21P48565 tT(UGU)G2tT(UGU)G2 72 nt-0.79□□□□□ -2.54
RIM21P48565 tT(UGU)PtT(UGU)P 72 nt-0.79□□□□□ -2.54
RIM21P48565 snR73snR73 106 nt-0.89□□□□□ -2.55
RIM21P48565 tP(UGG)QtP(UGG)Q 72 nt-0.92□□□□□ -2.56
RIM21P48565 YNR077CYNR077C 255 nt-1□□□□□ -2.57
RIM21P48565 YBR223W-AYBR223W-A 120 nt-1.1□□□□□ -2.59
RIM21P48565 snR58snR58 96 nt-1.11□□□□□ -2.59
RIM21P48565 tC(GCA)QtC(GCA)Q 76 nt-1.13□□□□□ -2.59
RIM21P48565 YOR309CYOR309C 381 nt-1.23□□□□□ -2.61
RIM21P48565 tY(GUA)QtY(GUA)Q 84 nt-1.26□□□□□ -2.61
RIM21P48565 snR87snR87 109 nt-1.77□□□□□ -2.69
RIM21P48565 YBR126W-BYBR126W-B 144 nt-1.86□□□□□ -2.71
RIM21P48565 YDR543CYDR543C 300 nt-2.52□□□□□ -2.81
RIM21P48565 YOL166W-AYOL166W-A 156 nt-2.6□□□□□ -2.83
RIM21P48565 YJL136W-AYJL136W-A 84 nt-3.37□□□□□ -2.95
RIM21P48565 YJR162CYJR162C 351 nt-3.51□□□□□ -2.97
Retrieved 29 of 7,029 protein–RNA pairs in 7.8 ms