Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 SBH2YER019C-A 267 nt0.03□□□□□ -2.4
VPS53P47061 snR161snR161 161 nt-0.13□□□□□ -2.43
VPS53P47061 YJL113WYJL113W 4647 nt-0.29□□□□□ -2.46
VPS53P47061 snR40snR40 97 nt-0.36□□□□□ -2.47
VPS53P47061 snR6snR6 112 nt-0.54□□□□□ -2.5
VPS53P47061 CDC65tQ(CUG)M 72 nt-0.54□□□□□ -2.5
VPS53P47061 YOR335W-AYOR335W-A 81 nt-0.56□□□□□ -2.5
VPS53P47061 YHL009W-BYHL009W-B 5409 nt-0.63□□□□□ -2.51
VPS53P47061 snR33snR33 183 nt-0.64□□□□□ -2.51
VPS53P47061 RPL41BYDL133C-A 78 nt-0.65□□□□□ -2.51
VPS53P47061 YMR315W-AYMR315W-A 108 nt-0.65□□□□□ -2.51
VPS53P47061 URB1YKL014C 5295 nt-0.66□□□□□ -2.52
VPS53P47061 tP(UGG)QtP(UGG)Q 72 nt-0.71□□□□□ -2.52
VPS53P47061 snR73snR73 106 nt-0.76□□□□□ -2.53
VPS53P47061 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
VPS53P47061 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
VPS53P47061 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
VPS53P47061 YOR309CYOR309C 381 nt-0.93□□□□□ -2.56
VPS53P47061 YNR077CYNR077C 255 nt-0.96□□□□□ -2.56
VPS53P47061 tC(GCA)QtC(GCA)Q 76 nt-1.14□□□□□ -2.59
VPS53P47061 snR58snR58 96 nt-1.16□□□□□ -2.6
VPS53P47061 YBR223W-AYBR223W-A 120 nt-1.22□□□□□ -2.6
VPS53P47061 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
VPS53P47061 snR87snR87 109 nt-1.44□□□□□ -2.64
VPS53P47061 YBR126W-BYBR126W-B 144 nt-2.05□□□□□ -2.74
VPS53P47061 YOL166W-AYOL166W-A 156 nt-2.76□□□□□ -2.85
VPS53P47061 YDR543CYDR543C 300 nt-2.79□□□□□ -2.86
VPS53P47061 YJL136W-AYJL136W-A 84 nt-3.12□□□□□ -2.91
VPS53P47061 YJR162CYJR162C 351 nt-3.86□□□□□ -3.03
Retrieved 29 of 7,029 protein–RNA pairs in 6.5 ms