Protein–RNA interactions for Protein: P47047

MTR4, ATP-dependent RNA helicase DOB1, yeastyeast

Known RBP Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MTR4P47047 YJL113WYJL113W 4647 nt0.04□□□□□ -2.4
MTR4P47047 snR77snR77 88 nt0.03□□□□□ -2.4
MTR4P47047 snR161snR161 161 nt-0.14□□□□□ -2.43
MTR4P47047 snR40snR40 97 nt-0.37□□□□□ -2.47
MTR4P47047 YHL009W-BYHL009W-B 5409 nt-0.47□□□□□ -2.48
MTR4P47047 CDC65tQ(CUG)M 72 nt-0.49□□□□□ -2.49
MTR4P47047 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
MTR4P47047 snR6snR6 112 nt-0.5□□□□□ -2.49
MTR4P47047 YNR077CYNR077C 255 nt-0.5□□□□□ -2.49
MTR4P47047 YOR335W-AYOR335W-A 81 nt-0.52□□□□□ -2.49
MTR4P47047 YMR315W-AYMR315W-A 108 nt-0.61□□□□□ -2.51
MTR4P47047 snR33snR33 183 nt-0.61□□□□□ -2.51
MTR4P47047 tP(UGG)QtP(UGG)Q 72 nt-0.63□□□□□ -2.51
MTR4P47047 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
MTR4P47047 tT(UGU)G2tT(UGU)G2 72 nt-0.65□□□□□ -2.51
MTR4P47047 tT(UGU)PtT(UGU)P 72 nt-0.65□□□□□ -2.51
MTR4P47047 RPL41BYDL133C-A 78 nt-0.66□□□□□ -2.52
MTR4P47047 snR73snR73 106 nt-0.69□□□□□ -2.52
MTR4P47047 YBR223W-AYBR223W-A 120 nt-0.81□□□□□ -2.54
MTR4P47047 YOR309CYOR309C 381 nt-0.85□□□□□ -2.55
MTR4P47047 snR58snR58 96 nt-1.15□□□□□ -2.59
MTR4P47047 tC(GCA)QtC(GCA)Q 76 nt-1.15□□□□□ -2.59
MTR4P47047 tY(GUA)QtY(GUA)Q 84 nt-1.15□□□□□ -2.59
MTR4P47047 snR87snR87 109 nt-1.32□□□□□ -2.62
MTR4P47047 YOL166W-AYOL166W-A 156 nt-1.65□□□□□ -2.67
MTR4P47047 YDR543CYDR543C 300 nt-1.84□□□□□ -2.7
MTR4P47047 YBR126W-BYBR126W-B 144 nt-1.92□□□□□ -2.72
MTR4P47047 YJL136W-AYJL136W-A 84 nt-2.93□□□□□ -2.88
MTR4P47047 YJR162CYJR162C 351 nt-2.96□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 6.5 ms