Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 YKL096C-BYKL096C-B 150 nt-0.27□□□□□ -2.45
IRR1P40541 YJL113WYJL113W 4647 nt-0.33□□□□□ -2.46
IRR1P40541 snR75snR75 89 nt-0.55□□□□□ -2.5
IRR1P40541 URB1YKL014C 5295 nt-0.57□□□□□ -2.5
IRR1P40541 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
IRR1P40541 YHL009W-BYHL009W-B 5409 nt-0.58□□□□□ -2.5
IRR1P40541 snR33snR33 183 nt-0.62□□□□□ -2.51
IRR1P40541 snR6snR6 112 nt-0.65□□□□□ -2.51
IRR1P40541 YOR335W-AYOR335W-A 81 nt-0.67□□□□□ -2.52
IRR1P40541 YMR315W-AYMR315W-A 108 nt-0.68□□□□□ -2.52
IRR1P40541 tP(UGG)QtP(UGG)Q 72 nt-0.7□□□□□ -2.52
IRR1P40541 snR40snR40 97 nt-0.7□□□□□ -2.52
IRR1P40541 RPL41BYDL133C-A 78 nt-0.77□□□□□ -2.53
IRR1P40541 snR73snR73 106 nt-0.83□□□□□ -2.54
IRR1P40541 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
IRR1P40541 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
IRR1P40541 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
IRR1P40541 YOR309CYOR309C 381 nt-0.96□□□□□ -2.56
IRR1P40541 tY(GUA)QtY(GUA)Q 84 nt-1.18□□□□□ -2.6
IRR1P40541 YBR223W-AYBR223W-A 120 nt-1.23□□□□□ -2.61
IRR1P40541 snR58snR58 96 nt-1.27□□□□□ -2.61
IRR1P40541 tC(GCA)QtC(GCA)Q 76 nt-1.31□□□□□ -2.62
IRR1P40541 YNR077CYNR077C 255 nt-1.42□□□□□ -2.64
IRR1P40541 snR87snR87 109 nt-1.47□□□□□ -2.64
IRR1P40541 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
IRR1P40541 YDR543CYDR543C 300 nt-2.84□□□□□ -2.86
IRR1P40541 YJL136W-AYJL136W-A 84 nt-3.01□□□□□ -2.89
IRR1P40541 YOL166W-AYOL166W-A 156 nt-3.34□□□□□ -2.94
IRR1P40541 YJR162CYJR162C 351 nt-3.8□□□□□ -3.02
Retrieved 29 of 7,029 protein–RNA pairs in 6.2 ms