Protein–RNA interactions for Protein: P40344

ATG3, Autophagy-related protein 3, yeastyeast

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG3P40344 tA(UGC)QtA(UGC)Q 76 nt0.17□□□□□ -2.38
ATG3P40344 snR40snR40 97 nt0.04□□□□□ -2.4
ATG3P40344 YJL113WYJL113W 4647 nt0.02□□□□□ -2.41
ATG3P40344 snR161snR161 161 nt-0.03□□□□□ -2.41
ATG3P40344 snR6snR6 112 nt-0.33□□□□□ -2.46
ATG3P40344 YOR335W-AYOR335W-A 81 nt-0.38□□□□□ -2.47
ATG3P40344 CDC65tQ(CUG)M 72 nt-0.46□□□□□ -2.48
ATG3P40344 RPL41BYDL133C-A 78 nt-0.49□□□□□ -2.49
ATG3P40344 YHL009W-BYHL009W-B 5409 nt-0.5□□□□□ -2.49
ATG3P40344 URB1YKL014C 5295 nt-0.57□□□□□ -2.5
ATG3P40344 snR73snR73 106 nt-0.6□□□□□ -2.51
ATG3P40344 YMR315W-AYMR315W-A 108 nt-0.64□□□□□ -2.51
ATG3P40344 snR33snR33 183 nt-0.66□□□□□ -2.52
ATG3P40344 tT(UGU)G1tT(UGU)G1 72 nt-0.8□□□□□ -2.54
ATG3P40344 tT(UGU)G2tT(UGU)G2 72 nt-0.8□□□□□ -2.54
ATG3P40344 tT(UGU)PtT(UGU)P 72 nt-0.8□□□□□ -2.54
ATG3P40344 tP(UGG)QtP(UGG)Q 72 nt-0.81□□□□□ -2.54
ATG3P40344 tC(GCA)QtC(GCA)Q 76 nt-0.91□□□□□ -2.56
ATG3P40344 YNR077CYNR077C 255 nt-0.97□□□□□ -2.56
ATG3P40344 snR58snR58 96 nt-0.98□□□□□ -2.57
ATG3P40344 YOR309CYOR309C 381 nt-0.98□□□□□ -2.57
ATG3P40344 YBR223W-AYBR223W-A 120 nt-1.03□□□□□ -2.57
ATG3P40344 tY(GUA)QtY(GUA)Q 84 nt-1.29□□□□□ -2.62
ATG3P40344 snR87snR87 109 nt-1.44□□□□□ -2.64
ATG3P40344 YBR126W-BYBR126W-B 144 nt-1.94□□□□□ -2.72
ATG3P40344 YDR543CYDR543C 300 nt-2.34□□□□□ -2.78
ATG3P40344 YOL166W-AYOL166W-A 156 nt-2.39□□□□□ -2.79
ATG3P40344 YJL136W-AYJL136W-A 84 nt-3.47□□□□□ -2.96
ATG3P40344 YJR162CYJR162C 351 nt-3.52□□□□□ -2.97
Retrieved 29 of 7,029 protein–RNA pairs in 5.8 ms