Protein–RNA interactions for Protein: P40020

FIR1, Factor interacting with REF2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FIR1P40020 tA(UGC)QtA(UGC)Q 76 nt0.13□□□□□ -2.39
FIR1P40020 YJL113WYJL113W 4647 nt0.07□□□□□ -2.4
FIR1P40020 snR161snR161 161 nt-0.11□□□□□ -2.43
FIR1P40020 snR40snR40 97 nt-0.21□□□□□ -2.44
FIR1P40020 YHL009W-BYHL009W-B 5409 nt-0.28□□□□□ -2.45
FIR1P40020 YNR077CYNR077C 255 nt-0.34□□□□□ -2.46
FIR1P40020 snR6snR6 112 nt-0.45□□□□□ -2.48
FIR1P40020 YOR335W-AYOR335W-A 81 nt-0.49□□□□□ -2.49
FIR1P40020 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
FIR1P40020 CDC65tQ(CUG)M 72 nt-0.5□□□□□ -2.49
FIR1P40020 snR33snR33 183 nt-0.54□□□□□ -2.5
FIR1P40020 tT(UGU)G1tT(UGU)G1 72 nt-0.58□□□□□ -2.5
FIR1P40020 tT(UGU)G2tT(UGU)G2 72 nt-0.58□□□□□ -2.5
FIR1P40020 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
FIR1P40020 RPL41BYDL133C-A 78 nt-0.6□□□□□ -2.51
FIR1P40020 YMR315W-AYMR315W-A 108 nt-0.6□□□□□ -2.51
FIR1P40020 tP(UGG)QtP(UGG)Q 72 nt-0.61□□□□□ -2.51
FIR1P40020 snR73snR73 106 nt-0.69□□□□□ -2.52
FIR1P40020 YBR223W-AYBR223W-A 120 nt-0.77□□□□□ -2.53
FIR1P40020 YOR309CYOR309C 381 nt-0.85□□□□□ -2.55
FIR1P40020 tC(GCA)QtC(GCA)Q 76 nt-1.01□□□□□ -2.57
FIR1P40020 tY(GUA)QtY(GUA)Q 84 nt-1.04□□□□□ -2.58
FIR1P40020 snR58snR58 96 nt-1.07□□□□□ -2.58
FIR1P40020 snR87snR87 109 nt-1.31□□□□□ -2.62
FIR1P40020 YBR126W-BYBR126W-B 144 nt-1.65□□□□□ -2.67
FIR1P40020 YOL166W-AYOL166W-A 156 nt-1.66□□□□□ -2.68
FIR1P40020 YDR543CYDR543C 300 nt-1.79□□□□□ -2.7
FIR1P40020 YJL136W-AYJL136W-A 84 nt-2.63□□□□□ -2.83
FIR1P40020 YJR162CYJR162C 351 nt-2.64□□□□□ -2.83
Retrieved 29 of 7,029 protein–RNA pairs in 6 ms