Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 snR77snR77 88 nt0□□□□□ -2.41
RPN3P40016 snR161snR161 161 nt-0.11□□□□□ -2.43
RPN3P40016 snR40snR40 97 nt-0.37□□□□□ -2.47
RPN3P40016 YJL113WYJL113W 4647 nt-0.39□□□□□ -2.47
RPN3P40016 CDC65tQ(CUG)M 72 nt-0.56□□□□□ -2.5
RPN3P40016 YOR335W-AYOR335W-A 81 nt-0.57□□□□□ -2.5
RPN3P40016 URB1YKL014C 5295 nt-0.57□□□□□ -2.5
RPN3P40016 snR6snR6 112 nt-0.59□□□□□ -2.5
RPN3P40016 RPL41BYDL133C-A 78 nt-0.62□□□□□ -2.51
RPN3P40016 YMR315W-AYMR315W-A 108 nt-0.67□□□□□ -2.52
RPN3P40016 snR33snR33 183 nt-0.69□□□□□ -2.52
RPN3P40016 tT(UGU)G1tT(UGU)G1 72 nt-0.75□□□□□ -2.53
RPN3P40016 tT(UGU)G2tT(UGU)G2 72 nt-0.75□□□□□ -2.53
RPN3P40016 tT(UGU)PtT(UGU)P 72 nt-0.75□□□□□ -2.53
RPN3P40016 YHL009W-BYHL009W-B 5409 nt-0.76□□□□□ -2.53
RPN3P40016 tP(UGG)QtP(UGG)Q 72 nt-0.77□□□□□ -2.53
RPN3P40016 snR73snR73 106 nt-0.78□□□□□ -2.53
RPN3P40016 YNR077CYNR077C 255 nt-0.93□□□□□ -2.56
RPN3P40016 YOR309CYOR309C 381 nt-1□□□□□ -2.57
RPN3P40016 YBR223W-AYBR223W-A 120 nt-1.03□□□□□ -2.57
RPN3P40016 tC(GCA)QtC(GCA)Q 76 nt-1.15□□□□□ -2.59
RPN3P40016 snR58snR58 96 nt-1.17□□□□□ -2.6
RPN3P40016 tY(GUA)QtY(GUA)Q 84 nt-1.33□□□□□ -2.62
RPN3P40016 snR87snR87 109 nt-1.52□□□□□ -2.65
RPN3P40016 YBR126W-BYBR126W-B 144 nt-2.11□□□□□ -2.75
RPN3P40016 YDR543CYDR543C 300 nt-2.35□□□□□ -2.79
RPN3P40016 YOL166W-AYOL166W-A 156 nt-2.37□□□□□ -2.79
RPN3P40016 YJL136W-AYJL136W-A 84 nt-3.34□□□□□ -2.94
RPN3P40016 YJR162CYJR162C 351 nt-3.45□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 12.9 ms