Protein–RNA interactions for Protein: P39705

NUP60, Nucleoporin NUP60, yeastyeast

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP60P39705 YKL096C-BYKL096C-B 150 nt-0.3□□□□□ -2.46
NUP60P39705 YJL113WYJL113W 4647 nt-0.37□□□□□ -2.47
NUP60P39705 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
NUP60P39705 YHL009W-BYHL009W-B 5409 nt-0.62□□□□□ -2.51
NUP60P39705 snR75snR75 89 nt-0.64□□□□□ -2.51
NUP60P39705 snR33snR33 183 nt-0.65□□□□□ -2.51
NUP60P39705 CDC65tQ(CUG)M 72 nt-0.66□□□□□ -2.52
NUP60P39705 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
NUP60P39705 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
NUP60P39705 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
NUP60P39705 snR6snR6 112 nt-0.79□□□□□ -2.54
NUP60P39705 YMR315W-AYMR315W-A 108 nt-0.79□□□□□ -2.54
NUP60P39705 YOR335W-AYOR335W-A 81 nt-0.81□□□□□ -2.54
NUP60P39705 snR40snR40 97 nt-0.82□□□□□ -2.54
NUP60P39705 RPL41BYDL133C-A 78 nt-0.83□□□□□ -2.54
NUP60P39705 tP(UGG)QtP(UGG)Q 72 nt-0.83□□□□□ -2.54
NUP60P39705 snR73snR73 106 nt-0.98□□□□□ -2.57
NUP60P39705 YBR223W-AYBR223W-A 120 nt-0.99□□□□□ -2.57
NUP60P39705 YNR077CYNR077C 255 nt-1.12□□□□□ -2.59
NUP60P39705 YOR309CYOR309C 381 nt-1.12□□□□□ -2.59
NUP60P39705 tY(GUA)QtY(GUA)Q 84 nt-1.22□□□□□ -2.6
NUP60P39705 snR58snR58 96 nt-1.38□□□□□ -2.63
NUP60P39705 tC(GCA)QtC(GCA)Q 76 nt-1.44□□□□□ -2.64
NUP60P39705 snR87snR87 109 nt-1.7□□□□□ -2.68
NUP60P39705 YBR126W-BYBR126W-B 144 nt-1.82□□□□□ -2.7
NUP60P39705 YDR543CYDR543C 300 nt-2.26□□□□□ -2.77
NUP60P39705 YOL166W-AYOL166W-A 156 nt-2.43□□□□□ -2.8
NUP60P39705 YJR162CYJR162C 351 nt-3.28□□□□□ -2.93
NUP60P39705 YJL136W-AYJL136W-A 84 nt-3.3□□□□□ -2.94
Retrieved 29 of 7,029 protein–RNA pairs in 22.1 ms