Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdh4P39038 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh4P39038 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdh4P39038 Gm15565-201ENSMUST00000118890 427 ntBASIC16.42■□□□□ 0.22
Cdh4P39038 Gm7638-201ENSMUST00000121348 967 ntBASIC16.42■□□□□ 0.22
Cdh4P39038 Gm27463-201ENSMUST00000183569 57 ntBASIC16.42■□□□□ 0.22
Cdh4P39038 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdh4P39038 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh4P39038 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh4P39038 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh4P39038 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh4P39038 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh4P39038 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh4P39038 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Cdh4P39038 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh4P39038 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh4P39038 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdh4P39038 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdh4P39038 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdh4P39038 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh4P39038 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdh4P39038 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.39■□□□□ 0.21
Cdh4P39038 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Cdh4P39038 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdh4P39038 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.39■□□□□ 0.21
Cdh4P39038 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cdh4P39038 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh4P39038 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdh4P39038 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdh4P39038 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdh4P39038 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.38■□□□□ 0.21
Cdh4P39038 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.38■□□□□ 0.21
Cdh4P39038 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Cdh4P39038 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.38■□□□□ 0.21
Cdh4P39038 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cdh4P39038 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.38■□□□□ 0.21
Cdh4P39038 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Gm9731-201ENSMUST00000209480 747 ntBASIC16.38■□□□□ 0.21
Cdh4P39038 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdh4P39038 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdh4P39038 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cdh4P39038 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cdh4P39038 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.37■□□□□ 0.21
Cdh4P39038 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.37■□□□□ 0.21
Cdh4P39038 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.37■□□□□ 0.21
Cdh4P39038 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cdh4P39038 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdh4P39038 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms