Protein–RNA interactions for Protein: P38861

NMD3, 60S ribosomal export protein NMD3, yeastyeast

Known RBP Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD3P38861 snR77snR77 88 nt0.17□□□□□ -2.38
NMD3P38861 tA(UGC)QtA(UGC)Q 76 nt0.13□□□□□ -2.39
NMD3P38861 YHL009W-BYHL009W-B 5409 nt-0.04□□□□□ -2.42
NMD3P38861 snR161snR161 161 nt-0.05□□□□□ -2.42
NMD3P38861 snR40snR40 97 nt-0.12□□□□□ -2.43
NMD3P38861 RPL41BYDL133C-A 78 nt-0.37□□□□□ -2.47
NMD3P38861 YNR077CYNR077C 255 nt-0.4□□□□□ -2.47
NMD3P38861 snR6snR6 112 nt-0.46□□□□□ -2.48
NMD3P38861 CDC65tQ(CUG)M 72 nt-0.46□□□□□ -2.48
NMD3P38861 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
NMD3P38861 tT(UGU)G1tT(UGU)G1 72 nt-0.48□□□□□ -2.49
NMD3P38861 tT(UGU)G2tT(UGU)G2 72 nt-0.48□□□□□ -2.49
NMD3P38861 tT(UGU)PtT(UGU)P 72 nt-0.48□□□□□ -2.49
NMD3P38861 YOR335W-AYOR335W-A 81 nt-0.5□□□□□ -2.49
NMD3P38861 YMR315W-AYMR315W-A 108 nt-0.61□□□□□ -2.51
NMD3P38861 snR33snR33 183 nt-0.61□□□□□ -2.51
NMD3P38861 YBR223W-AYBR223W-A 120 nt-0.62□□□□□ -2.51
NMD3P38861 snR73snR73 106 nt-0.66□□□□□ -2.52
NMD3P38861 tP(UGG)QtP(UGG)Q 72 nt-0.75□□□□□ -2.53
NMD3P38861 tC(GCA)QtC(GCA)Q 76 nt-0.76□□□□□ -2.53
NMD3P38861 snR58snR58 96 nt-0.77□□□□□ -2.53
NMD3P38861 YOR309CYOR309C 381 nt-0.96□□□□□ -2.56
NMD3P38861 tY(GUA)QtY(GUA)Q 84 nt-1.16□□□□□ -2.6
NMD3P38861 YOL166W-AYOL166W-A 156 nt-1.23□□□□□ -2.61
NMD3P38861 snR87snR87 109 nt-1.38□□□□□ -2.63
NMD3P38861 YDR543CYDR543C 300 nt-1.38□□□□□ -2.63
NMD3P38861 YBR126W-BYBR126W-B 144 nt-1.46□□□□□ -2.64
NMD3P38861 YJR162CYJR162C 351 nt-2.24□□□□□ -2.77
NMD3P38861 YJL136W-AYJL136W-A 84 nt-3.09□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 6.6 ms