Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 snR161snR161 161 nt-0.2□□□□□ -2.44
PEX28P38848 YJL113WYJL113W 4647 nt-0.23□□□□□ -2.45
PEX28P38848 snR75snR75 89 nt-0.25□□□□□ -2.45
PEX28P38848 YHL009W-BYHL009W-B 5409 nt-0.44□□□□□ -2.48
PEX28P38848 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
PEX28P38848 snR40snR40 97 nt-0.64□□□□□ -2.51
PEX28P38848 CDC65tQ(CUG)M 72 nt-0.68□□□□□ -2.52
PEX28P38848 snR33snR33 183 nt-0.68□□□□□ -2.52
PEX28P38848 tT(UGU)G1tT(UGU)G1 72 nt-0.69□□□□□ -2.52
PEX28P38848 tT(UGU)G2tT(UGU)G2 72 nt-0.69□□□□□ -2.52
PEX28P38848 tT(UGU)PtT(UGU)P 72 nt-0.69□□□□□ -2.52
PEX28P38848 RPL41BYDL133C-A 78 nt-0.75□□□□□ -2.53
PEX28P38848 YNR077CYNR077C 255 nt-0.77□□□□□ -2.53
PEX28P38848 snR6snR6 112 nt-0.78□□□□□ -2.53
PEX28P38848 YOR335W-AYOR335W-A 81 nt-0.79□□□□□ -2.54
PEX28P38848 YMR315W-AYMR315W-A 108 nt-0.83□□□□□ -2.54
PEX28P38848 tP(UGG)QtP(UGG)Q 72 nt-0.88□□□□□ -2.55
PEX28P38848 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
PEX28P38848 snR73snR73 106 nt-1□□□□□ -2.57
PEX28P38848 YOR309CYOR309C 381 nt-1.23□□□□□ -2.61
PEX28P38848 tY(GUA)QtY(GUA)Q 84 nt-1.29□□□□□ -2.62
PEX28P38848 snR58snR58 96 nt-1.32□□□□□ -2.62
PEX28P38848 tC(GCA)QtC(GCA)Q 76 nt-1.36□□□□□ -2.63
PEX28P38848 snR87snR87 109 nt-1.82□□□□□ -2.7
PEX28P38848 YBR126W-BYBR126W-B 144 nt-1.82□□□□□ -2.7
PEX28P38848 YDR543CYDR543C 300 nt-2.2□□□□□ -2.76
PEX28P38848 YOL166W-AYOL166W-A 156 nt-2.3□□□□□ -2.78
PEX28P38848 YJR162CYJR162C 351 nt-3.08□□□□□ -2.9
PEX28P38848 YJL136W-AYJL136W-A 84 nt-3.45□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 2.9 ms