Protein–RNA interactions for Protein: P38360

PCA1, P-type cation-transporting ATPase, yeastyeast

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCA1P38360 SBH2YER019C-A 267 nt0□□□□□ -2.41
PCA1P38360 snR161snR161 161 nt-0.05□□□□□ -2.42
PCA1P38360 YJL113WYJL113W 4647 nt-0.19□□□□□ -2.44
PCA1P38360 snR40snR40 97 nt-0.19□□□□□ -2.44
PCA1P38360 YOR335W-AYOR335W-A 81 nt-0.27□□□□□ -2.45
PCA1P38360 snR6snR6 112 nt-0.31□□□□□ -2.46
PCA1P38360 CDC65tQ(CUG)M 72 nt-0.31□□□□□ -2.46
PCA1P38360 YMR315W-AYMR315W-A 108 nt-0.34□□□□□ -2.46
PCA1P38360 RPL41BYDL133C-A 78 nt-0.35□□□□□ -2.47
PCA1P38360 YNR077CYNR077C 255 nt-0.35□□□□□ -2.47
PCA1P38360 tP(UGG)QtP(UGG)Q 72 nt-0.38□□□□□ -2.47
PCA1P38360 snR33snR33 183 nt-0.39□□□□□ -2.47
PCA1P38360 snR73snR73 106 nt-0.4□□□□□ -2.47
PCA1P38360 YHL009W-BYHL009W-B 5409 nt-0.41□□□□□ -2.47
PCA1P38360 URB1YKL014C 5295 nt-0.41□□□□□ -2.48
PCA1P38360 YOR309CYOR309C 381 nt-0.53□□□□□ -2.49
PCA1P38360 tT(UGU)G1tT(UGU)G1 72 nt-0.56□□□□□ -2.5
PCA1P38360 tT(UGU)G2tT(UGU)G2 72 nt-0.56□□□□□ -2.5
PCA1P38360 tT(UGU)PtT(UGU)P 72 nt-0.56□□□□□ -2.5
PCA1P38360 tC(GCA)QtC(GCA)Q 76 nt-0.66□□□□□ -2.52
PCA1P38360 snR58snR58 96 nt-0.69□□□□□ -2.52
PCA1P38360 tY(GUA)QtY(GUA)Q 84 nt-0.75□□□□□ -2.53
PCA1P38360 snR87snR87 109 nt-0.82□□□□□ -2.54
PCA1P38360 YBR223W-AYBR223W-A 120 nt-0.82□□□□□ -2.54
PCA1P38360 YBR126W-BYBR126W-B 144 nt-1.33□□□□□ -2.62
PCA1P38360 YOL166W-AYOL166W-A 156 nt-1.49□□□□□ -2.65
PCA1P38360 YDR543CYDR543C 300 nt-1.85□□□□□ -2.71
PCA1P38360 YJL136W-AYJL136W-A 84 nt-1.86□□□□□ -2.71
PCA1P38360 YJR162CYJR162C 351 nt-2.64□□□□□ -2.83
Retrieved 29 of 7,029 protein–RNA pairs in 100 ms