Protein–RNA interactions for Protein: P38344

REI1, Cytoplasmic 60S subunit biogenesis factor REI1, yeastyeast

Predicted RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
REI1P38344 tA(UGC)QtA(UGC)Q 76 nt0.13□□□□□ -2.39
REI1P38344 YJL113WYJL113W 4647 nt0.01□□□□□ -2.41
REI1P38344 snR161snR161 161 nt-0.04□□□□□ -2.42
REI1P38344 snR40snR40 97 nt-0.08□□□□□ -2.42
REI1P38344 YHL009W-BYHL009W-B 5409 nt-0.39□□□□□ -2.47
REI1P38344 URB1YKL014C 5295 nt-0.41□□□□□ -2.47
REI1P38344 snR6snR6 112 nt-0.41□□□□□ -2.48
REI1P38344 YOR335W-AYOR335W-A 81 nt-0.42□□□□□ -2.48
REI1P38344 RPL41BYDL133C-A 78 nt-0.45□□□□□ -2.48
REI1P38344 CDC65tQ(CUG)M 72 nt-0.45□□□□□ -2.48
REI1P38344 YMR315W-AYMR315W-A 108 nt-0.59□□□□□ -2.5
REI1P38344 snR73snR73 106 nt-0.62□□□□□ -2.51
REI1P38344 snR33snR33 183 nt-0.66□□□□□ -2.52
REI1P38344 tP(UGG)QtP(UGG)Q 72 nt-0.76□□□□□ -2.53
REI1P38344 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
REI1P38344 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
REI1P38344 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
REI1P38344 tC(GCA)QtC(GCA)Q 76 nt-0.84□□□□□ -2.54
REI1P38344 YNR077CYNR077C 255 nt-0.87□□□□□ -2.55
REI1P38344 snR58snR58 96 nt-0.89□□□□□ -2.55
REI1P38344 YOR309CYOR309C 381 nt-0.92□□□□□ -2.56
REI1P38344 YBR223W-AYBR223W-A 120 nt-0.98□□□□□ -2.57
REI1P38344 tY(GUA)QtY(GUA)Q 84 nt-1.26□□□□□ -2.61
REI1P38344 snR87snR87 109 nt-1.35□□□□□ -2.63
REI1P38344 YBR126W-BYBR126W-B 144 nt-1.91□□□□□ -2.72
REI1P38344 YOL166W-AYOL166W-A 156 nt-2.22□□□□□ -2.76
REI1P38344 YDR543CYDR543C 300 nt-2.27□□□□□ -2.77
REI1P38344 YJL136W-AYJL136W-A 84 nt-3.21□□□□□ -2.92
REI1P38344 YJR162CYJR162C 351 nt-3.44□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 48.5 ms