Protein–RNA interactions for Protein: P38339

RGD1, RHO GTPase-activating protein RGD1, yeastyeast

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGD1P38339 snR161snR161 161 nt-0.19□□□□□ -2.44
RGD1P38339 snR75snR75 89 nt-0.29□□□□□ -2.46
RGD1P38339 YJL113WYJL113W 4647 nt-0.42□□□□□ -2.48
RGD1P38339 URB1YKL014C 5295 nt-0.47□□□□□ -2.48
RGD1P38339 YHL009W-BYHL009W-B 5409 nt-0.54□□□□□ -2.5
RGD1P38339 snR40snR40 97 nt-0.62□□□□□ -2.51
RGD1P38339 CDC65tQ(CUG)M 72 nt-0.66□□□□□ -2.52
RGD1P38339 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
RGD1P38339 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
RGD1P38339 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
RGD1P38339 snR6snR6 112 nt-0.74□□□□□ -2.53
RGD1P38339 snR33snR33 183 nt-0.74□□□□□ -2.53
RGD1P38339 YOR335W-AYOR335W-A 81 nt-0.75□□□□□ -2.53
RGD1P38339 RPL41BYDL133C-A 78 nt-0.77□□□□□ -2.53
RGD1P38339 YMR315W-AYMR315W-A 108 nt-0.79□□□□□ -2.54
RGD1P38339 tP(UGG)QtP(UGG)Q 72 nt-0.88□□□□□ -2.55
RGD1P38339 snR73snR73 106 nt-0.95□□□□□ -2.56
RGD1P38339 YNR077CYNR077C 255 nt-1.1□□□□□ -2.59
RGD1P38339 YBR223W-AYBR223W-A 120 nt-1.1□□□□□ -2.59
RGD1P38339 YOR309CYOR309C 381 nt-1.15□□□□□ -2.59
RGD1P38339 snR58snR58 96 nt-1.35□□□□□ -2.63
RGD1P38339 tC(GCA)QtC(GCA)Q 76 nt-1.38□□□□□ -2.63
RGD1P38339 tY(GUA)QtY(GUA)Q 84 nt-1.42□□□□□ -2.64
RGD1P38339 snR87snR87 109 nt-1.74□□□□□ -2.69
RGD1P38339 YBR126W-BYBR126W-B 144 nt-1.96□□□□□ -2.72
RGD1P38339 YDR543CYDR543C 300 nt-2.48□□□□□ -2.81
RGD1P38339 YOL166W-AYOL166W-A 156 nt-2.77□□□□□ -2.85
RGD1P38339 YJR162CYJR162C 351 nt-3.43□□□□□ -2.96
RGD1P38339 YJL136W-AYJL136W-A 84 nt-3.62□□□□□ -2.99
Retrieved 29 of 7,029 protein–RNA pairs in 96.6 ms