Protein–RNA interactions for Protein: P38170

BRN1, Condensin complex subunit 2, yeastyeast

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRN1P38170 snR77snR77 88 nt-0.34□□□□□ -2.46
BRN1P38170 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
BRN1P38170 snR33snR33 183 nt-0.5□□□□□ -2.49
BRN1P38170 CDC65tQ(CUG)M 72 nt-0.53□□□□□ -2.49
BRN1P38170 YKL096C-BYKL096C-B 150 nt-0.55□□□□□ -2.5
BRN1P38170 YHL009W-BYHL009W-B 5409 nt-0.57□□□□□ -2.5
BRN1P38170 tP(UGG)QtP(UGG)Q 72 nt-0.58□□□□□ -2.5
BRN1P38170 snR6snR6 112 nt-0.62□□□□□ -2.51
BRN1P38170 YMR315W-AYMR315W-A 108 nt-0.62□□□□□ -2.51
BRN1P38170 YOR335W-AYOR335W-A 81 nt-0.65□□□□□ -2.51
BRN1P38170 tT(UGU)G1tT(UGU)G1 72 nt-0.67□□□□□ -2.52
BRN1P38170 tT(UGU)G2tT(UGU)G2 72 nt-0.67□□□□□ -2.52
BRN1P38170 tT(UGU)PtT(UGU)P 72 nt-0.67□□□□□ -2.52
BRN1P38170 RPL41BYDL133C-A 78 nt-0.76□□□□□ -2.53
BRN1P38170 snR73snR73 106 nt-0.77□□□□□ -2.53
BRN1P38170 snR40snR40 97 nt-0.78□□□□□ -2.53
BRN1P38170 snR75snR75 89 nt-0.8□□□□□ -2.54
BRN1P38170 YNR077CYNR077C 255 nt-0.81□□□□□ -2.54
BRN1P38170 YOR309CYOR309C 381 nt-0.81□□□□□ -2.54
BRN1P38170 tY(GUA)QtY(GUA)Q 84 nt-0.96□□□□□ -2.56
BRN1P38170 YBR223W-AYBR223W-A 120 nt-1.08□□□□□ -2.58
BRN1P38170 snR58snR58 96 nt-1.19□□□□□ -2.6
BRN1P38170 tC(GCA)QtC(GCA)Q 76 nt-1.25□□□□□ -2.61
BRN1P38170 snR87snR87 109 nt-1.28□□□□□ -2.61
BRN1P38170 YBR126W-BYBR126W-B 144 nt-1.61□□□□□ -2.67
BRN1P38170 YJL136W-AYJL136W-A 84 nt-2.45□□□□□ -2.8
BRN1P38170 YDR543CYDR543C 300 nt-2.46□□□□□ -2.8
BRN1P38170 YOL166W-AYOL166W-A 156 nt-2.53□□□□□ -2.81
BRN1P38170 YJR162CYJR162C 351 nt-3.16□□□□□ -2.92
Retrieved 29 of 7,029 protein–RNA pairs in 5.3 ms