Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 snR40snR40 97 nt0.46□□□□□ -2.34
TFA1P36100 tA(UGC)QtA(UGC)Q 76 nt0.34□□□□□ -2.36
TFA1P36100 YJL113WYJL113W 4647 nt0.23□□□□□ -2.37
TFA1P36100 snR161snR161 161 nt0.09□□□□□ -2.4
TFA1P36100 snR6snR6 112 nt-0.28□□□□□ -2.45
TFA1P36100 YOR335W-AYOR335W-A 81 nt-0.31□□□□□ -2.46
TFA1P36100 RPL41BYDL133C-A 78 nt-0.44□□□□□ -2.48
TFA1P36100 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
TFA1P36100 CDC65tQ(CUG)M 72 nt-0.52□□□□□ -2.49
TFA1P36100 YHL009W-BYHL009W-B 5409 nt-0.6□□□□□ -2.5
TFA1P36100 snR73snR73 106 nt-0.64□□□□□ -2.51
TFA1P36100 snR33snR33 183 nt-0.65□□□□□ -2.51
TFA1P36100 tT(UGU)G1tT(UGU)G1 72 nt-0.66□□□□□ -2.52
TFA1P36100 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
TFA1P36100 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
TFA1P36100 YMR315W-AYMR315W-A 108 nt-0.77□□□□□ -2.53
TFA1P36100 tP(UGG)QtP(UGG)Q 72 nt-0.89□□□□□ -2.55
TFA1P36100 tC(GCA)QtC(GCA)Q 76 nt-0.9□□□□□ -2.55
TFA1P36100 YBR223W-AYBR223W-A 120 nt-0.92□□□□□ -2.56
TFA1P36100 snR58snR58 96 nt-1.05□□□□□ -2.58
TFA1P36100 YNR077CYNR077C 255 nt-1.22□□□□□ -2.6
TFA1P36100 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
TFA1P36100 YOR309CYOR309C 381 nt-1.25□□□□□ -2.61
TFA1P36100 YBR126W-BYBR126W-B 144 nt-1.69□□□□□ -2.68
TFA1P36100 snR87snR87 109 nt-1.81□□□□□ -2.7
TFA1P36100 YDR543CYDR543C 300 nt-2.1□□□□□ -2.75
TFA1P36100 YOL166W-AYOL166W-A 156 nt-2.42□□□□□ -2.8
TFA1P36100 YJR162CYJR162C 351 nt-2.91□□□□□ -2.88
TFA1P36100 YJL136W-AYJL136W-A 84 nt-3.37□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 3.4 ms