Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 snR40snR40 97 nt0.24□□□□□ -2.37
DEF1P35732 tA(UGC)QtA(UGC)Q 76 nt0.14□□□□□ -2.39
DEF1P35732 snR161snR161 161 nt0.08□□□□□ -2.4
DEF1P35732 YOR335W-AYOR335W-A 81 nt-0.15□□□□□ -2.43
DEF1P35732 RPL41BYDL133C-A 78 nt-0.19□□□□□ -2.44
DEF1P35732 snR6snR6 112 nt-0.21□□□□□ -2.44
DEF1P35732 YJL113WYJL113W 4647 nt-0.28□□□□□ -2.45
DEF1P35732 CDC65tQ(CUG)M 72 nt-0.29□□□□□ -2.46
DEF1P35732 YMR315W-AYMR315W-A 108 nt-0.33□□□□□ -2.46
DEF1P35732 snR73snR73 106 nt-0.34□□□□□ -2.46
DEF1P35732 URB1YKL014C 5295 nt-0.45□□□□□ -2.48
DEF1P35732 tC(GCA)QtC(GCA)Q 76 nt-0.48□□□□□ -2.49
DEF1P35732 tP(UGG)QtP(UGG)Q 72 nt-0.5□□□□□ -2.49
DEF1P35732 snR33snR33 183 nt-0.52□□□□□ -2.49
DEF1P35732 YHL009W-BYHL009W-B 5409 nt-0.55□□□□□ -2.5
DEF1P35732 snR58snR58 96 nt-0.57□□□□□ -2.5
DEF1P35732 tT(UGU)G1tT(UGU)G1 72 nt-0.57□□□□□ -2.5
DEF1P35732 tT(UGU)G2tT(UGU)G2 72 nt-0.57□□□□□ -2.5
DEF1P35732 tT(UGU)PtT(UGU)P 72 nt-0.57□□□□□ -2.5
DEF1P35732 YOR309CYOR309C 381 nt-0.62□□□□□ -2.51
DEF1P35732 YBR223W-AYBR223W-A 120 nt-0.8□□□□□ -2.54
DEF1P35732 snR87snR87 109 nt-0.91□□□□□ -2.56
DEF1P35732 YNR077CYNR077C 255 nt-0.97□□□□□ -2.56
DEF1P35732 tY(GUA)QtY(GUA)Q 84 nt-0.98□□□□□ -2.57
DEF1P35732 YBR126W-BYBR126W-B 144 nt-1.54□□□□□ -2.66
DEF1P35732 YDR543CYDR543C 300 nt-1.83□□□□□ -2.7
DEF1P35732 YOL166W-AYOL166W-A 156 nt-2.01□□□□□ -2.73
DEF1P35732 YJL136W-AYJL136W-A 84 nt-2.41□□□□□ -2.8
DEF1P35732 YJR162CYJR162C 351 nt-2.57□□□□□ -2.82
Retrieved 29 of 7,029 protein–RNA pairs in 5.4 ms