Protein–RNA interactions for Protein: P33298

RPT3, 26S proteasome regulatory subunit 6B homolog, yeast

Known RBP Predictions only

Length 428 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	P33298	snR77	snR77	88 nt		-0.33	□□□□□ -2.46
RPT3	P33298	YKL096C-B	YKL096C-B	150 nt		-0.41	□□□□□ -2.48
RPT3	P33298	YHL009W-B	YHL009W-B	5409 nt		-0.45	□□□□□ -2.48
RPT3	P33298	CDC65	tQ(CUG)M	72 nt		-0.6	□□□□□ -2.51
RPT3	P33298	URB1	YKL014C	5295 nt		-0.62	□□□□□ -2.51
RPT3	P33298	snR33	snR33	183 nt		-0.62	□□□□□ -2.51
RPT3	P33298	snR6	snR6	112 nt		-0.72	□□□□□ -2.52
RPT3	P33298	snR75	snR75	89 nt		-0.74	□□□□□ -2.53
RPT3	P33298	tP(UGG)Q	tP(UGG)Q	72 nt		-0.74	□□□□□ -2.53
RPT3	P33298	YMR315W-A	YMR315W-A	108 nt		-0.74	□□□□□ -2.53
RPT3	P33298	YOR335W-A	YOR335W-A	81 nt		-0.77	□□□□□ -2.53
RPT3	P33298	RPL41B	YDL133C-A	78 nt		-0.82	□□□□□ -2.54
RPT3	P33298	snR40	snR40	97 nt		-0.84	□□□□□ -2.54
RPT3	P33298	tT(UGU)G1	tT(UGU)G1	72 nt		-0.87	□□□□□ -2.55
RPT3	P33298	tT(UGU)G2	tT(UGU)G2	72 nt		-0.87	□□□□□ -2.55
RPT3	P33298	tT(UGU)P	tT(UGU)P	72 nt		-0.87	□□□□□ -2.55
RPT3	P33298	snR73	snR73	106 nt		-0.9	□□□□□ -2.55
RPT3	P33298	YOR309C	YOR309C	381 nt		-1.02	□□□□□ -2.57
RPT3	P33298	tY(GUA)Q	tY(GUA)Q	84 nt		-1.17	□□□□□ -2.6
RPT3	P33298	YBR223W-A	YBR223W-A	120 nt		-1.26	□□□□□ -2.61
RPT3	P33298	snR58	snR58	96 nt		-1.29	□□□□□ -2.62
RPT3	P33298	YNR077C	YNR077C	255 nt		-1.34	□□□□□ -2.62
RPT3	P33298	tC(GCA)Q	tC(GCA)Q	76 nt		-1.36	□□□□□ -2.63
RPT3	P33298	snR87	snR87	109 nt		-1.55	□□□□□ -2.66
RPT3	P33298	YBR126W-B	YBR126W-B	144 nt		-1.95	□□□□□ -2.72
RPT3	P33298	YDR543C	YDR543C	300 nt		-2.9	□□□□□ -2.87
RPT3	P33298	YJL136W-A	YJL136W-A	84 nt		-3.04	□□□□□ -2.9
RPT3	P33298	YOL166W-A	YOL166W-A	156 nt		-3.1	□□□□□ -2.91
RPT3	P33298	YJR162C	YJR162C	351 nt		-3.85	□□□□□ -3.03

Retrieved 29 of 7,029 protein–RNA pairs in 5.5 ms