Protein–RNA interactions for Protein: P32908

SMC1, Structural maintenance of chromosomes protein 1, yeastyeast

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMC1P32908 snR77snR77 88 nt0.02□□□□□ -2.41
SMC1P32908 snR161snR161 161 nt-0.14□□□□□ -2.43
SMC1P32908 YJL113WYJL113W 4647 nt-0.22□□□□□ -2.44
SMC1P32908 snR40snR40 97 nt-0.4□□□□□ -2.47
SMC1P32908 YHL009W-BYHL009W-B 5409 nt-0.56□□□□□ -2.5
SMC1P32908 URB1YKL014C 5295 nt-0.57□□□□□ -2.5
SMC1P32908 CDC65tQ(CUG)M 72 nt-0.6□□□□□ -2.51
SMC1P32908 snR6snR6 112 nt-0.61□□□□□ -2.51
SMC1P32908 YOR335W-AYOR335W-A 81 nt-0.64□□□□□ -2.51
SMC1P32908 RPL41BYDL133C-A 78 nt-0.69□□□□□ -2.52
SMC1P32908 tT(UGU)G1tT(UGU)G1 72 nt-0.75□□□□□ -2.53
SMC1P32908 tT(UGU)G2tT(UGU)G2 72 nt-0.75□□□□□ -2.53
SMC1P32908 tT(UGU)PtT(UGU)P 72 nt-0.75□□□□□ -2.53
SMC1P32908 snR33snR33 183 nt-0.75□□□□□ -2.53
SMC1P32908 YMR315W-AYMR315W-A 108 nt-0.76□□□□□ -2.53
SMC1P32908 snR73snR73 106 nt-0.85□□□□□ -2.55
SMC1P32908 tP(UGG)QtP(UGG)Q 72 nt-0.89□□□□□ -2.55
SMC1P32908 YBR223W-AYBR223W-A 120 nt-1.09□□□□□ -2.58
SMC1P32908 YNR077CYNR077C 255 nt-1.11□□□□□ -2.59
SMC1P32908 YOR309CYOR309C 381 nt-1.13□□□□□ -2.59
SMC1P32908 tC(GCA)QtC(GCA)Q 76 nt-1.23□□□□□ -2.61
SMC1P32908 snR58snR58 96 nt-1.24□□□□□ -2.61
SMC1P32908 tY(GUA)QtY(GUA)Q 84 nt-1.42□□□□□ -2.64
SMC1P32908 snR87snR87 109 nt-1.69□□□□□ -2.68
SMC1P32908 YBR126W-BYBR126W-B 144 nt-1.98□□□□□ -2.73
SMC1P32908 YDR543CYDR543C 300 nt-2.51□□□□□ -2.81
SMC1P32908 YOL166W-AYOL166W-A 156 nt-2.53□□□□□ -2.81
SMC1P32908 YJR162CYJR162C 351 nt-3.53□□□□□ -2.97
SMC1P32908 YJL136W-AYJL136W-A 84 nt-3.75□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 6.1 ms