Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 snR77snR77 88 nt-0.25□□□□□ -2.45
RPD3P32561 snR161snR161 161 nt-0.25□□□□□ -2.45
RPD3P32561 YHL009W-BYHL009W-B 5409 nt-0.33□□□□□ -2.46
RPD3P32561 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
RPD3P32561 snR75snR75 89 nt-0.51□□□□□ -2.49
RPD3P32561 CDC65tQ(CUG)M 72 nt-0.54□□□□□ -2.5
RPD3P32561 snR33snR33 183 nt-0.54□□□□□ -2.5
RPD3P32561 tP(UGG)QtP(UGG)Q 72 nt-0.61□□□□□ -2.51
RPD3P32561 YMR315W-AYMR315W-A 108 nt-0.64□□□□□ -2.51
RPD3P32561 snR6snR6 112 nt-0.65□□□□□ -2.51
RPD3P32561 YNR077CYNR077C 255 nt-0.66□□□□□ -2.52
RPD3P32561 YOR335W-AYOR335W-A 81 nt-0.69□□□□□ -2.52
RPD3P32561 tT(UGU)G1tT(UGU)G1 72 nt-0.7□□□□□ -2.52
RPD3P32561 tT(UGU)G2tT(UGU)G2 72 nt-0.7□□□□□ -2.52
RPD3P32561 tT(UGU)PtT(UGU)P 72 nt-0.7□□□□□ -2.52
RPD3P32561 RPL41BYDL133C-A 78 nt-0.77□□□□□ -2.53
RPD3P32561 snR40snR40 97 nt-0.79□□□□□ -2.54
RPD3P32561 snR73snR73 106 nt-0.8□□□□□ -2.54
RPD3P32561 YOR309CYOR309C 381 nt-0.86□□□□□ -2.55
RPD3P32561 YBR223W-AYBR223W-A 120 nt-0.87□□□□□ -2.55
RPD3P32561 tY(GUA)QtY(GUA)Q 84 nt-1□□□□□ -2.57
RPD3P32561 snR58snR58 96 nt-1.24□□□□□ -2.61
RPD3P32561 tC(GCA)QtC(GCA)Q 76 nt-1.29□□□□□ -2.62
RPD3P32561 snR87snR87 109 nt-1.34□□□□□ -2.62
RPD3P32561 YBR126W-BYBR126W-B 144 nt-1.68□□□□□ -2.68
RPD3P32561 YOL166W-AYOL166W-A 156 nt-1.81□□□□□ -2.7
RPD3P32561 YDR543CYDR543C 300 nt-2□□□□□ -2.73
RPD3P32561 YJL136W-AYJL136W-A 84 nt-2.6□□□□□ -2.83
RPD3P32561 YJR162CYJR162C 351 nt-3.09□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 6.7 ms