Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YLR149C-AYLR149C-A 87 nt-0.46□□□□□ -2.48
MSH1P25846 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
MSH1P25846 YHL009W-BYHL009W-B 5409 nt-0.51□□□□□ -2.49
MSH1P25846 snR33snR33 183 nt-0.61□□□□□ -2.51
MSH1P25846 CDC65tQ(CUG)M 72 nt-0.64□□□□□ -2.51
MSH1P25846 tP(UGG)QtP(UGG)Q 72 nt-0.71□□□□□ -2.52
MSH1P25846 tT(UGU)G1tT(UGU)G1 72 nt-0.72□□□□□ -2.52
MSH1P25846 tT(UGU)G2tT(UGU)G2 72 nt-0.72□□□□□ -2.52
MSH1P25846 tT(UGU)PtT(UGU)P 72 nt-0.72□□□□□ -2.52
MSH1P25846 YKL096C-BYKL096C-B 150 nt-0.72□□□□□ -2.52
MSH1P25846 YMR315W-AYMR315W-A 108 nt-0.76□□□□□ -2.53
MSH1P25846 snR6snR6 112 nt-0.81□□□□□ -2.54
MSH1P25846 YNR077CYNR077C 255 nt-0.81□□□□□ -2.54
MSH1P25846 YOR335W-AYOR335W-A 81 nt-0.81□□□□□ -2.54
MSH1P25846 RPL41BYDL133C-A 78 nt-0.95□□□□□ -2.56
MSH1P25846 snR73snR73 106 nt-0.97□□□□□ -2.56
MSH1P25846 YBR223W-AYBR223W-A 120 nt-0.99□□□□□ -2.57
MSH1P25846 YOR309CYOR309C 381 nt-1.01□□□□□ -2.57
MSH1P25846 snR40snR40 97 nt-1.01□□□□□ -2.57
MSH1P25846 snR75snR75 89 nt-1.05□□□□□ -2.58
MSH1P25846 tY(GUA)QtY(GUA)Q 84 nt-1.16□□□□□ -2.6
MSH1P25846 snR58snR58 96 nt-1.47□□□□□ -2.64
MSH1P25846 tC(GCA)QtC(GCA)Q 76 nt-1.53□□□□□ -2.65
MSH1P25846 snR87snR87 109 nt-1.59□□□□□ -2.66
MSH1P25846 YBR126W-BYBR126W-B 144 nt-1.92□□□□□ -2.72
MSH1P25846 YDR543CYDR543C 300 nt-2.27□□□□□ -2.77
MSH1P25846 YOL166W-AYOL166W-A 156 nt-2.33□□□□□ -2.78
MSH1P25846 YJL136W-AYJL136W-A 84 nt-3.03□□□□□ -2.89
MSH1P25846 YJR162CYJR162C 351 nt-3.23□□□□□ -2.93
Retrieved 29 of 7,029 protein–RNA pairs in 81.7 ms