Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 snR77snR77 88 nt-0.3□□□□□ -2.46
CDC48P25694 YKL096C-BYKL096C-B 150 nt-0.31□□□□□ -2.46
CDC48P25694 URB1YKL014C 5295 nt-0.54□□□□□ -2.5
CDC48P25694 tT(UGU)G1tT(UGU)G1 72 nt-0.56□□□□□ -2.5
CDC48P25694 tT(UGU)G2tT(UGU)G2 72 nt-0.56□□□□□ -2.5
CDC48P25694 tT(UGU)PtT(UGU)P 72 nt-0.56□□□□□ -2.5
CDC48P25694 snR33snR33 183 nt-0.58□□□□□ -2.5
CDC48P25694 YHL009W-BYHL009W-B 5409 nt-0.59□□□□□ -2.5
CDC48P25694 YNR077CYNR077C 255 nt-0.67□□□□□ -2.52
CDC48P25694 snR75snR75 89 nt-0.69□□□□□ -2.52
CDC48P25694 CDC65tQ(CUG)M 72 nt-0.72□□□□□ -2.52
CDC48P25694 tP(UGG)QtP(UGG)Q 72 nt-0.74□□□□□ -2.53
CDC48P25694 snR6snR6 112 nt-0.85□□□□□ -2.55
CDC48P25694 YMR315W-AYMR315W-A 108 nt-0.88□□□□□ -2.55
CDC48P25694 YOR335W-AYOR335W-A 81 nt-0.89□□□□□ -2.55
CDC48P25694 snR40snR40 97 nt-0.9□□□□□ -2.55
CDC48P25694 RPL41BYDL133C-A 78 nt-0.92□□□□□ -2.56
CDC48P25694 YBR223W-AYBR223W-A 120 nt-0.94□□□□□ -2.56
CDC48P25694 snR73snR73 106 nt-1.07□□□□□ -2.58
CDC48P25694 tY(GUA)QtY(GUA)Q 84 nt-1.11□□□□□ -2.59
CDC48P25694 YOR309CYOR309C 381 nt-1.24□□□□□ -2.61
CDC48P25694 snR58snR58 96 nt-1.5□□□□□ -2.65
CDC48P25694 tC(GCA)QtC(GCA)Q 76 nt-1.57□□□□□ -2.66
CDC48P25694 YBR126W-BYBR126W-B 144 nt-1.58□□□□□ -2.66
CDC48P25694 snR87snR87 109 nt-1.87□□□□□ -2.71
CDC48P25694 YDR543CYDR543C 300 nt-2.09□□□□□ -2.74
CDC48P25694 YOL166W-AYOL166W-A 156 nt-2.17□□□□□ -2.76
CDC48P25694 YJR162CYJR162C 351 nt-2.82□□□□□ -2.86
CDC48P25694 YJL136W-AYJL136W-A 84 nt-3□□□□□ -2.89
Retrieved 29 of 7,029 protein–RNA pairs in 46.6 ms