Protein–RNA interactions for Protein: P23642

VAN1, Mannan polymerase I complex VAN1 subunit, yeastyeast

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAN1P23642 tA(UGC)QtA(UGC)Q 76 nt0.1□□□□□ -2.39
VAN1P23642 YJL113WYJL113W 4647 nt0.01□□□□□ -2.41
VAN1P23642 snR161snR161 161 nt-0.12□□□□□ -2.43
VAN1P23642 snR40snR40 97 nt-0.3□□□□□ -2.46
VAN1P23642 YHL009W-BYHL009W-B 5409 nt-0.38□□□□□ -2.47
VAN1P23642 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
VAN1P23642 snR6snR6 112 nt-0.58□□□□□ -2.5
VAN1P23642 CDC65tQ(CUG)M 72 nt-0.58□□□□□ -2.5
VAN1P23642 YOR335W-AYOR335W-A 81 nt-0.61□□□□□ -2.51
VAN1P23642 RPL41BYDL133C-A 78 nt-0.63□□□□□ -2.51
VAN1P23642 tT(UGU)G1tT(UGU)G1 72 nt-0.68□□□□□ -2.52
VAN1P23642 tT(UGU)G2tT(UGU)G2 72 nt-0.68□□□□□ -2.52
VAN1P23642 tT(UGU)PtT(UGU)P 72 nt-0.68□□□□□ -2.52
VAN1P23642 snR33snR33 183 nt-0.72□□□□□ -2.52
VAN1P23642 YMR315W-AYMR315W-A 108 nt-0.76□□□□□ -2.53
VAN1P23642 snR73snR73 106 nt-0.82□□□□□ -2.54
VAN1P23642 tP(UGG)QtP(UGG)Q 72 nt-0.92□□□□□ -2.56
VAN1P23642 YBR223W-AYBR223W-A 120 nt-0.94□□□□□ -2.56
VAN1P23642 YNR077CYNR077C 255 nt-1.04□□□□□ -2.58
VAN1P23642 tC(GCA)QtC(GCA)Q 76 nt-1.14□□□□□ -2.59
VAN1P23642 YOR309CYOR309C 381 nt-1.15□□□□□ -2.59
VAN1P23642 snR58snR58 96 nt-1.16□□□□□ -2.6
VAN1P23642 tY(GUA)QtY(GUA)Q 84 nt-1.35□□□□□ -2.63
VAN1P23642 snR87snR87 109 nt-1.69□□□□□ -2.68
VAN1P23642 YBR126W-BYBR126W-B 144 nt-1.78□□□□□ -2.69
VAN1P23642 YDR543CYDR543C 300 nt-2.19□□□□□ -2.76
VAN1P23642 YOL166W-AYOL166W-A 156 nt-2.42□□□□□ -2.8
VAN1P23642 YJR162CYJR162C 351 nt-3.03□□□□□ -2.89
VAN1P23642 YJL136W-AYJL136W-A 84 nt-3.79□□□□□ -3.02
Retrieved 29 of 7,029 protein–RNA pairs in 72.5 ms