Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 tA(UGC)QtA(UGC)Q 76 nt0.1□□□□□ -2.39
HCA4P20448 YJL113WYJL113W 4647 nt0.04□□□□□ -2.4
HCA4P20448 snR161snR161 161 nt-0.06□□□□□ -2.42
HCA4P20448 snR40snR40 97 nt-0.06□□□□□ -2.42
HCA4P20448 snR6snR6 112 nt-0.24□□□□□ -2.45
HCA4P20448 YOR335W-AYOR335W-A 81 nt-0.26□□□□□ -2.45
HCA4P20448 CDC65tQ(CUG)M 72 nt-0.33□□□□□ -2.46
HCA4P20448 YHL009W-BYHL009W-B 5409 nt-0.34□□□□□ -2.46
HCA4P20448 snR73snR73 106 nt-0.43□□□□□ -2.48
HCA4P20448 RPL41BYDL133C-A 78 nt-0.44□□□□□ -2.48
HCA4P20448 YMR315W-AYMR315W-A 108 nt-0.46□□□□□ -2.48
HCA4P20448 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
HCA4P20448 snR33snR33 183 nt-0.53□□□□□ -2.49
HCA4P20448 tP(UGG)QtP(UGG)Q 72 nt-0.54□□□□□ -2.5
HCA4P20448 tT(UGU)G1tT(UGU)G1 72 nt-0.66□□□□□ -2.52
HCA4P20448 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
HCA4P20448 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
HCA4P20448 YOR309CYOR309C 381 nt-0.66□□□□□ -2.52
HCA4P20448 tC(GCA)QtC(GCA)Q 76 nt-0.74□□□□□ -2.53
HCA4P20448 snR58snR58 96 nt-0.79□□□□□ -2.54
HCA4P20448 snR87snR87 109 nt-1.01□□□□□ -2.57
HCA4P20448 tY(GUA)QtY(GUA)Q 84 nt-1.01□□□□□ -2.57
HCA4P20448 YBR223W-AYBR223W-A 120 nt-1.15□□□□□ -2.59
HCA4P20448 YNR077CYNR077C 255 nt-1.29□□□□□ -2.62
HCA4P20448 YBR126W-BYBR126W-B 144 nt-1.73□□□□□ -2.69
HCA4P20448 YJL136W-AYJL136W-A 84 nt-2.53□□□□□ -2.81
HCA4P20448 YDR543CYDR543C 300 nt-2.6□□□□□ -2.83
HCA4P20448 YOL166W-AYOL166W-A 156 nt-2.94□□□□□ -2.88
HCA4P20448 YJR162CYJR162C 351 nt-3.35□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 2.6 ms