Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 SBH2YER019C-A 267 nt0.07□□□□□ -2.4
CDC43P18898 YJL113WYJL113W 4647 nt0.01□□□□□ -2.41
CDC43P18898 snR161snR161 161 nt-0.1□□□□□ -2.43
CDC43P18898 snR40snR40 97 nt-0.18□□□□□ -2.44
CDC43P18898 snR6snR6 112 nt-0.3□□□□□ -2.46
CDC43P18898 YOR335W-AYOR335W-A 81 nt-0.33□□□□□ -2.46
CDC43P18898 CDC65tQ(CUG)M 72 nt-0.36□□□□□ -2.47
CDC43P18898 YHL009W-BYHL009W-B 5409 nt-0.38□□□□□ -2.47
CDC43P18898 snR73snR73 106 nt-0.49□□□□□ -2.49
CDC43P18898 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
CDC43P18898 YMR315W-AYMR315W-A 108 nt-0.52□□□□□ -2.49
CDC43P18898 RPL41BYDL133C-A 78 nt-0.53□□□□□ -2.49
CDC43P18898 snR33snR33 183 nt-0.57□□□□□ -2.5
CDC43P18898 tP(UGG)QtP(UGG)Q 72 nt-0.59□□□□□ -2.5
CDC43P18898 tT(UGU)G1tT(UGU)G1 72 nt-0.66□□□□□ -2.52
CDC43P18898 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
CDC43P18898 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
CDC43P18898 YOR309CYOR309C 381 nt-0.72□□□□□ -2.52
CDC43P18898 YNR077CYNR077C 255 nt-0.77□□□□□ -2.53
CDC43P18898 tC(GCA)QtC(GCA)Q 76 nt-0.84□□□□□ -2.54
CDC43P18898 YBR223W-AYBR223W-A 120 nt-0.85□□□□□ -2.55
CDC43P18898 snR58snR58 96 nt-0.89□□□□□ -2.55
CDC43P18898 tY(GUA)QtY(GUA)Q 84 nt-1.06□□□□□ -2.58
CDC43P18898 snR87snR87 109 nt-1.1□□□□□ -2.59
CDC43P18898 YBR126W-BYBR126W-B 144 nt-1.81□□□□□ -2.7
CDC43P18898 YDR543CYDR543C 300 nt-1.94□□□□□ -2.72
CDC43P18898 YOL166W-AYOL166W-A 156 nt-1.98□□□□□ -2.73
CDC43P18898 YJL136W-AYJL136W-A 84 nt-2.71□□□□□ -2.84
CDC43P18898 YJR162CYJR162C 351 nt-2.94□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 5.1 ms