Protein–RNA interactions for Protein: P16649

TUP1, General transcriptional corepressor TUP1, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUP1P16649 snR77snR77 88 nt-0.16□□□□□ -2.44
TUP1P16649 snR161snR161 161 nt-0.18□□□□□ -2.44
TUP1P16649 snR75snR75 89 nt-0.38□□□□□ -2.47
TUP1P16649 YHL009W-BYHL009W-B 5409 nt-0.48□□□□□ -2.49
TUP1P16649 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
TUP1P16649 CDC65tQ(CUG)M 72 nt-0.53□□□□□ -2.49
TUP1P16649 snR40snR40 97 nt-0.57□□□□□ -2.5
TUP1P16649 snR6snR6 112 nt-0.59□□□□□ -2.5
TUP1P16649 snR33snR33 183 nt-0.59□□□□□ -2.5
TUP1P16649 YOR335W-AYOR335W-A 81 nt-0.6□□□□□ -2.51
TUP1P16649 tT(UGU)G1tT(UGU)G1 72 nt-0.61□□□□□ -2.51
TUP1P16649 tT(UGU)G2tT(UGU)G2 72 nt-0.61□□□□□ -2.51
TUP1P16649 tT(UGU)PtT(UGU)P 72 nt-0.61□□□□□ -2.51
TUP1P16649 YMR315W-AYMR315W-A 108 nt-0.63□□□□□ -2.51
TUP1P16649 tP(UGG)QtP(UGG)Q 72 nt-0.66□□□□□ -2.52
TUP1P16649 RPL41BYDL133C-A 78 nt-0.68□□□□□ -2.52
TUP1P16649 YNR077CYNR077C 255 nt-0.74□□□□□ -2.53
TUP1P16649 snR73snR73 106 nt-0.76□□□□□ -2.53
TUP1P16649 YBR223W-AYBR223W-A 120 nt-0.86□□□□□ -2.55
TUP1P16649 YOR309CYOR309C 381 nt-0.89□□□□□ -2.55
TUP1P16649 tY(GUA)QtY(GUA)Q 84 nt-1.12□□□□□ -2.59
TUP1P16649 snR58snR58 96 nt-1.15□□□□□ -2.59
TUP1P16649 tC(GCA)QtC(GCA)Q 76 nt-1.17□□□□□ -2.6
TUP1P16649 snR87snR87 109 nt-1.37□□□□□ -2.63
TUP1P16649 YBR126W-BYBR126W-B 144 nt-1.77□□□□□ -2.69
TUP1P16649 YDR543CYDR543C 300 nt-1.91□□□□□ -2.72
TUP1P16649 YOL166W-AYOL166W-A 156 nt-1.93□□□□□ -2.72
TUP1P16649 YJL136W-AYJL136W-A 84 nt-2.84□□□□□ -2.86
TUP1P16649 YJR162CYJR162C 351 nt-2.94□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 14.1 ms