Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TcraP01849 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.58□□□□□ -0.4
TcraP01849 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.57□□□□□ -0.4
TcraP01849 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.57□□□□□ -0.4
TcraP01849 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.57□□□□□ -0.4
TcraP01849 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.57□□□□□ -0.4
TcraP01849 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.57□□□□□ -0.4
TcraP01849 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TcraP01849 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.57□□□□□ -0.4
TcraP01849 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.57□□□□□ -0.4
TcraP01849 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
TcraP01849 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.57□□□□□ -0.4
TcraP01849 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TcraP01849 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TcraP01849 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
TcraP01849 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.56□□□□□ -0.4
TcraP01849 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
TcraP01849 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TcraP01849 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.55□□□□□ -0.4
TcraP01849 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TcraP01849 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TcraP01849 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TcraP01849 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.55□□□□□ -0.4
TcraP01849 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
TcraP01849 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.55□□□□□ -0.4
TcraP01849 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TcraP01849 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TcraP01849 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.55□□□□□ -0.4
TcraP01849 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.55□□□□□ -0.4
TcraP01849 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TcraP01849 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TcraP01849 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms