Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.59□□□□□ -0.23
Pde6dO55057 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.59□□□□□ -0.23
Pde6dO55057 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pde6dO55057 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.58□□□□□ -0.23
Pde6dO55057 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pde6dO55057 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Pde6dO55057 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.58□□□□□ -0.24
Pde6dO55057 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.58□□□□□ -0.24
Pde6dO55057 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.58□□□□□ -0.24
Pde6dO55057 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Pde6dO55057 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pde6dO55057 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Pde6dO55057 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Pde6dO55057 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.57□□□□□ -0.24
Pde6dO55057 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.57□□□□□ -0.24
Pde6dO55057 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pde6dO55057 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pde6dO55057 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pde6dO55057 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.56□□□□□ -0.24
Pde6dO55057 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Pde6dO55057 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.56□□□□□ -0.24
Pde6dO55057 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.56□□□□□ -0.24
Pde6dO55057 Gm9847-201ENSMUST00000052528 599 ntBASIC13.56□□□□□ -0.24
Pde6dO55057 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.56□□□□□ -0.24
Pde6dO55057 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pde6dO55057 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6dO55057 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.55□□□□□ -0.24
Pde6dO55057 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pde6dO55057 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.55□□□□□ -0.24
Pde6dO55057 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.55□□□□□ -0.24
Pde6dO55057 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.55□□□□□ -0.24
Pde6dO55057 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.55□□□□□ -0.24
Pde6dO55057 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Pde6dO55057 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6dO55057 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms