Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
AMBRA1Q9C0C7 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
AMBRA1Q9C0C7 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC122713.2-201ENST00000624942 3335 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC073342.2-201ENST00000595842 1800 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC011592.1-201ENST00000624647 3634 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 RNU6-386P-201ENST00000362650 107 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 RN7SKP107-201ENST00000364157 290 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC121334.1-201ENST00000396414 802 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 NPM1P31-201ENST00000399021 764 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 FDPSP6-201ENST00000425091 512 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AL591379.2-201ENST00000450223 397 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 FCF1P6-201ENST00000456841 595 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 RN7SL145P-201ENST00000469955 296 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 RPL5P15-201ENST00000475870 897 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC026826.1-201ENST00000493002 361 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC010409.2-201ENST00000505780 478 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC010460.2-201ENST00000509054 677 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 OR10D4P-201ENST00000525892 951 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC011270.1-201ENST00000558606 583 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC012181.2-201ENST00000570210 699 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC027796.1-201ENST00000575593 512 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 NPM1P45-201ENST00000583151 559 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 OR7A11P-201ENST00000597719 953 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC008385.1-201ENST00000604421 355 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AL109936.2-201ENST00000605350 650 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC104184.1-201ENST00000607513 721 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC109809.1-201ENST00000619665 545 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC097520.1-201ENST00000624435 385 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC097372.4-201ENST00000625025 466 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC006453.5-201ENST00000636451 619 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 TATDN2P3-201ENST00000452855 3665 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 AC099654.3-201ENST00000447087 1546 ntBASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AMBRA1Q9C0C7 DDX43P1-201ENST00000510713 1763 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 AC130456.1-201ENST00000565085 1363 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 WBP11P1-201ENST00000562560 1931 ntBASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
AMBRA1Q9C0C7 RNA5SP260-201ENST00000363849 111 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms