Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC007537.1-201ENST00000539347 327 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 NF1P12-201ENST00000549593 583 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 GTF2IP6-201ENST00000583143 541 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC122710.3-201ENST00000606566 541 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AP005212.3-201ENST00000619964 528 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AP004289.1-201ENST00000436307 2205 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL591848.4-201ENST00000567832 3472 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 AC102941.1-201ENST00000567616 1537 ntBASIC5.15□□□□□ -1.58
HLA-DRB4X5D2U9 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 SNORA70H-201ENST00000383910 135 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 SNORA70J-201ENST00000384182 135 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 RPL9P21-201ENST00000392269 505 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP148-201ENST00000410179 275 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP271-201ENST00000410528 320 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 RNA5SP280-201ENST00000411230 115 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC007365.2-201ENST00000428806 458 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC239800.1-201ENST00000442049 719 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 BX005266.3-201ENST00000443013 1075 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL354714.5-201ENST00000450131 590 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 TUBBP11-201ENST00000472255 252 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL135933.1-201ENST00000498657 802 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AP001646.2-201ENST00000528645 1156 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 NXPE2P1-201ENST00000543705 726 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 FAM30C-201ENST00000561158 410 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC233699.1-201ENST00000569955 1168 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 SNORA70D-201ENST00000578836 135 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL031429.2-201ENST00000602605 649 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC137695.1-201ENST00000604126 489 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL138960.1-201ENST00000613838 513 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AP001885.1-201ENST00000621658 558 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC243725.1-201ENST00000637164 436 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AL161901.1-201ENST00000624954 3425 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 QRSL1P3-201ENST00000552666 1316 ntBASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DRB4X5D2U9 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC068769.1-201ENST00000474767 2426 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP47-201ENST00000365347 328 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 SNORA11D-201ENST00000408548 128 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms