Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SUMO3P55854 RNU4-81P-201ENST00000363561 144 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 RNA5SP472-201ENST00000363868 119 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SUMO3P55854 MIR301B-201ENST00000390813 78 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 AL773545.3-201ENST00000414297 706 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 GRPEL2P2-201ENST00000421856 670 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 ATP5LP4-201ENST00000434169 307 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 FCF1P6-201ENST00000456841 595 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 WBP1LP1-201ENST00000460451 896 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AC131233.1-201ENST00000479200 955 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 CEACAMP3-202ENST00000483806 638 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 MTCO2P9-201ENST00000503214 694 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 RN7SKP242-201ENST00000515967 289 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AC067904.2-201ENST00000517322 1283 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 OR7E161P-201ENST00000533722 967 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC126177.6-201ENST00000550420 1009 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC090971.3-201ENST00000557871 1041 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 MIR1273F-201ENST00000580581 99 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 AL355816.2-201ENST00000610049 647 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AC015922.4-201ENST00000612568 690 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 MIR6731-201ENST00000614863 72 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.49□□□□□ -1.37
SUMO3P55854 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
SUMO3P55854 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
SUMO3P55854 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 OR5M2P-202ENST00000641241 4242 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 AC125232.1-201ENST00000452554 1408 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 PWRN1-212ENST00000569908 1435 ntBASIC6.49□□□□□ -1.37
SUMO3P55854 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.49□□□□□ -1.37
SUMO3P55854 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.48□□□□□ -1.37
SUMO3P55854 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SUMO3P55854 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC023886.2-201ENST00000321285 411 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 VDAC1P10-201ENST00000416715 891 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.48□□□□□ -1.37
SUMO3P55854 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.48□□□□□ -1.37
SUMO3P55854 MORF4L1P7-201ENST00000426038 703 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 MTCO1P51-201ENST00000427672 1060 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.48□□□□□ -1.37
SUMO3P55854 DEFA11P-201ENST00000446470 261 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 CCRL1P1-201ENST00000449542 1053 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AL034399.1-201ENST00000451535 380 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC114755.1-201ENST00000453101 868 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AGKP1-201ENST00000455254 1263 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 RPL5P15-201ENST00000475870 897 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms